RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 TNK2Q07912 1038 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 SMARCB1Q12824 385 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 PON2Q15165 354 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 LPAL2Q16609 132 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 DDR2Q16832 855 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 ARHGAP29Q52LW3 1261 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 OSTM1Q86WC4 334 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 HSCBQ8IWL3 235 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 SCN4BQ8IWT1 228 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 ADGRF2Q8IZF7 708 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 SUMF1Q8NBK3 374 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 RUBCNQ92622 972 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 LRRC27Q9C0I9 530 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 CHRDQ9H2X0 955 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 IL21Q9HBE4 155 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 TRPV5Q9NQA5 729 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 ZSCAN32Q9NX65 697 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 PTPRJQ12913 1337 aa12.84□□□□□ -0.35
SMPD4-217ENST00000473720 EP300Q09472 2414 aaPredicted RBP12.83□□□□□ -0.35
SMPD4-217ENST00000473720 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 SPECC1L-ADORA2AF8WAN1 911 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 POLR2DO15514 142 aaKnown RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 CLSTN1O94985 981 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 CHRNB1P11230 501 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 AVPR1AP37288 418 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 AFMP43652 599 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 CYP2J2P51589 502 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 AMPD3Q01432 767 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 SATB1Q01826 763 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 FCHO2Q0JRZ9 810 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 MYO1EQ12965 1108 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 PPP2R5DQ14738 602 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 E2F4Q16254 413 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 NFE2Q16621 373 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 INTS6LQ5JSJ4 861 aaKnown RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 TXNDC8Q6A555 127 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 TXNDC11Q6PKC3 985 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 SHC4Q6S5L8 630 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 SPATA2LQ8IUW3 424 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 TMEM86AQ8N2M4 240 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 LRRC52Q8N7C0 313 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 MMS19Q96T76 1030 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 BLZF1Q9H2G9 400 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 C8orf33Q9H7E9 229 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 THG1LQ9NWX6 298 aaKnown RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 HSPBP1Q9NZL4 362 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 CCL26Q9Y258 94 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 PCDHGA2Q9Y5H1 932 aa12.83□□□□□ -0.36
SMPD4-217ENST00000473720 MORC2Q9Y6X9 1032 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-217ENST00000473720 SDK1Q7Z5N4 2213 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 ATP2C2O75185 946 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 YEATS4O95619 227 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 PDGFRBP09619 1106 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 CSH1P0DML2 217 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 CSH2P0DML3 217 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
SMPD4-217ENST00000473720 TNNI1P19237 187 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 CTHP32929 405 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 ME1P48163 572 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 CCR3P51677 355 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 NLRP12P59046 1061 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 PSMC1P62191 440 aaKnown RBP12.82□□□□□ -0.36
SMPD4-217ENST00000473720 LRRC32Q14392 662 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 SOWAHAQ2M3V2 549 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 FAM26FQ5R3K3 315 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 HEATR6Q6AI08 1181 aaKnown RBP12.82□□□□□ -0.36
SMPD4-217ENST00000473720 TRIM68Q6AZZ1 485 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 PRR23BQ6ZRT6 265 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 Q6ZS52 159 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 CMTM8Q8IZV2 173 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 CELF5Q8N6W0 485 aaKnown RBP12.82□□□□□ -0.36
SMPD4-217ENST00000473720 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 MRPS31Q92665 395 aaKnown RBP12.82□□□□□ -0.36
SMPD4-217ENST00000473720 HPDLQ96IR7 371 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 ACBD6Q9BR61 282 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 CUEDC2Q9H467 287 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 EBF3Q9H4W6 596 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 SLC39A2Q9NP94 309 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 KBTBD4Q9NVX7 518 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 SMG5Q9UPR3 1016 aaKnown RBP12.82□□□□□ -0.36
SMPD4-217ENST00000473720 OTOGLQ3ZCN5 2332 aa12.82□□□□□ -0.36
SMPD4-217ENST00000473720 THADAQ6YHU6 1953 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 MYBPHLA2RUH7 354 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 KIAA0391O15091 583 aaKnown RBP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 EIF3DO15371 548 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 F13A1P00488 732 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 F11P03951 625 aa12.81□□□□□ -0.36
SMPD4-217ENST00000473720 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 HMGA1P17096 107 aaKnown RBP12.81□□□□□ -0.36
SMPD4-217ENST00000473720 LMO2P25791 158 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms