RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 FOXC1Q12948 553 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 GNL2Q13823 731 aaKnown RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 COL9A2Q14055 689 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 DHX8Q14562 1220 aaKnown RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 TMEM119Q4V9L6 283 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 ZC2HC1CQ53FD0 456 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 TTC16Q8NEE8 873 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 PI4K2AQ9BTU6 479 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 EDEM2Q9BV94 578 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 TIPINQ9BVW5 301 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 LINC00597Q9H2U6 94 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 VPS45Q9NRW7 570 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 TDP1Q9NUW8 608 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 HSFX1Q9UBD0 423 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 MAGED2Q9UNF1 606 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-209ENST00000473421 PCDHGA5Q9Y5G8 931 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 WNT6Q9Y6F9 365 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 FAM208BQ5VWN6 2430 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 ATRXP46100 2492 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 DMXL2Q8TDJ6 3036 aa13.64□□□□□ -0.23
TRAF4-209ENST00000473421 VWA3AA6NCI4 1184 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 CDX4O14627 284 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-209ENST00000473421 CAVIN2O95810 425 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 HNRNPLP14866 589 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAF4-209ENST00000473421 ZXDBP98169 803 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 ATP2C1P98194 919 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-209ENST00000473421 MESP2Q0VG99 397 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 DMC1Q14565 340 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 TMEM132DQ14C87 1099 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 VEPH1Q14D04 833 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 DDR2Q16832 855 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 CRELD2Q6UXH1 353 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-209ENST00000473421 UNQ6494/PRO21346Q6UXR6 183 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 EFCAB13Q8IY85 973 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 FRMD1Q8N878 549 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 P2RY13Q9BPV8 354 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 RAB34Q9BZG1 259 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 TPSD1Q9BZJ3 242 aa13.63□□□□□ -0.23
TRAF4-209ENST00000473421 PTPRDP23468 1912 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 TCHHQ07283 1943 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 THADAQ6YHU6 1953 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 ASCC3Q8N3C0 2202 aaKnown RBP13.62□□□□□ -0.23
TRAF4-209ENST00000473421 ATG13O75143 517 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 AKAP3O75969 853 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 ACAT1P24752 427 aaKnown RBP13.62□□□□□ -0.23
TRAF4-209ENST00000473421 CYP2F1P24903 491 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 AVPR1AP37288 418 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 GRIN1Q05586 938 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 GAB4Q2WGN9 574 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 SYT13Q7L8C5 426 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 MON1AQ86VX9 555 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 CAMKK1Q8N5S9 505 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 KCNN1Q92952 543 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 KIF2CQ99661 725 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 ECT2Q9H8V3 914 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 SH2B1Q9NRF2 756 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-209ENST00000473421 BLOC1S4Q9NUP1 217 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 DPP3Q9NY33 737 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
TRAF4-209ENST00000473421 C2orf78A6NCI8 922 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 K7ENM7 598 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-209ENST00000473421 DRD1P21728 446 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 ADSSP30520 456 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 DGKEP52429 567 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 ZNF131P52739 623 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 IRX4P78413 519 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 ZNF252P-AS1Q0IIN9 211 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 BFSP1Q12934 665 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 MCM6Q14566 821 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 MTF1Q14872 753 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 ZNF77Q15935 545 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 TAF12Q16514 161 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 EML3Q32P44 896 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 OSTM1Q86WC4 334 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 GPBP1Q86WP2 473 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 MYCT1Q8N699 235 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 FAM184AQ8NB25 1140 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 SPPL2BQ8TCT7 592 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 GCNAQ96QF7 691 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 PKMYT1Q99640 499 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
TRAF4-209ENST00000473421 GON4LQ3T8J9 2241 aa13.61□□□□□ -0.23
TRAF4-209ENST00000473421 KPNA7A9QM74 516 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 K7EQS6 105 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 LAD1O00515 517 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 SCAMP3O14828 347 aaKnown RBP13.6□□□□□ -0.23
TRAF4-209ENST00000473421 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
TRAF4-209ENST00000473421 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
TRAF4-209ENST00000473421 APBB3O95704 486 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 GBP1P32455 592 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 TAF6P49848 677 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 SEC13P55735 322 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 KCNA1Q09470 495 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 PSMD2Q13200 908 aa13.6□□□□□ -0.23
TRAF4-209ENST00000473421 CACNA1EQ15878 2313 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms