RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ZMAT3Q9HA38 289 aaKnown RBP6.46□□□□□ -1.38
RTF1-203ENST00000473214 SAYSD1Q9NPB0 183 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 CALCOCO1Q9P1Z2 691 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 CLCA2Q9UQC9 943 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ZNF451Q9Y4E5 1061 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 N6AMT1Q9Y5N5 214 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 NR2E3Q9Y5X4 410 aa6.46□□□□□ -1.38
RTF1-203ENST00000473214 ARHGEF5Q12774 1597 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ADAMTS13Q76LX8 1427 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 HMX3A6NHT5 357 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 DBX1A6NMT0 343 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 H7C1D1 291 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 AP3B1O00203 1094 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 TAF4O00268 1085 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 RIPK2O43353 540 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 PRPSAP2O60256 369 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 E2F6O75461 281 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 B3GALT4O96024 378 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 SNRPA1P09661 255 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 HSPA5P11021 654 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 TOP1P11387 765 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 YY1P25490 414 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 TLX1P31314 330 aaPredicted RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 ARL3P36405 182 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 THPOP40225 353 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 SLC26A5P58743 744 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 AP2B1P63010 937 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 CYP27A1Q02318 531 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 C17orf67Q0P5P2 114 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 EFR3AQ14156 821 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 INPP5AQ14642 412 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 PPP1R7Q15435 360 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ZNF124Q15973 351 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 PAN2Q504Q3 1202 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 CAVIN4Q5BKX8 364 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 RGS9BPQ6ZS82 235 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 OVCH1Q7RTY7 1134 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 HDXQ7Z353 690 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 CCDC186Q7Z3E2 898 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 PIWIL3Q7Z3Z3 882 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 SZRD1Q7Z422 152 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 CISD2Q8N5K1 135 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 ZNF610Q8N9Z0 462 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 MARCH10Q8NA82 808 aaPredicted RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 Q8NFD4 153 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 KCNG4Q8TDN1 519 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 SH3RF3Q8TEJ3 882 aaPredicted RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 STYXQ8WUJ0 223 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ZFAND2BQ8WV99 257 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 FAM120BQ96EK7 910 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 C1orf74Q96LT6 269 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 CCDC74BQ96LY2 380 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ZDHHC15Q96MV8 337 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ZNF396Q96N95 335 aaPredicted RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 PHF20Q9BVI0 1012 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 C1orf21Q9H246 121 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 MMADHCQ9H3L0 296 aaPredicted RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 NCOR1P1Q9H4R4 102 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 EPS8L2Q9H6S3 715 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ARMT1Q9H993 441 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 RXFP3Q9NSD7 469 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 SEPT11Q9NVA2 429 aaKnown RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.45□□□□□ -1.38
RTF1-203ENST00000473214 HECAQ9UBI9 543 aaPredicted RBP6.45□□□□□ -1.38
RTF1-203ENST00000473214 BACE2Q9Y5Z0 518 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 ACTL7BQ9Y614 415 aa6.45□□□□□ -1.38
RTF1-203ENST00000473214 MTUS2Q5JR59 1369 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 GLI3P10071 1580 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ARHGAP31Q2M1Z3 1444 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ARPC4-TTLL3A0A0A6YYG9 625 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 RGSL1A5PLK6 1076 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 CCDC169A6NNP5 214 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 M0QX08 132 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 SGK1O00141 431 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 STX6O43752 255 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 SMPD2O60906 423 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 NOL3O60936 208 aaKnown RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 CLEC3AO75596 197 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 PIAS2O75928 621 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 TNFRSF6BO95407 300 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 NFICP08651 508 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 TSPY4P0CV99 314 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 TSPY10P0CW01 314 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 SKILP12757 684 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 BRAFP15056 766 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 IFNAR1P17181 557 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 SLC9A1P19634 815 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 STAT5AP42229 794 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ASMTP46597 345 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 GPC3P51654 580 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 PPP5CP53041 499 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ARFIP1P53367 373 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 RAB1AP62820 205 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 FOXO4P98177 505 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 CHRNDQ07001 517 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ACTN3Q08043 901 aaPredicted RBP6.44□□□□□ -1.38
RTF1-203ENST00000473214 STK4Q13043 487 aa6.44□□□□□ -1.38
RTF1-203ENST00000473214 ZBTB17Q13105 803 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms