RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TMEM86AQ8N2M4 240 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 MMS19Q96T76 1030 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 ACBD6Q9BR61 282 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 RHOBTB2Q9BYZ6 727 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 DNAJC25Q9H1X3 360 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 CEP72Q9P209 647 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 HMGXB4Q9UGU5 601 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 SORCS3Q9UPU3 1222 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 COQ4Q9Y3A0 265 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 INSL5Q9Y5Q6 135 aa14.04□□□□□ -0.16
TPM3-216ENST00000473036 DMDP11532 3685 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 RIF1Q5UIP0 2472 aaKnown RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 CAVIN2O95810 425 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 PDGFRBP09619 1106 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 SP100P23497 879 aaPredicted RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 HOXA9P31269 272 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 PIK3CAP42336 1068 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 MXI1P50539 228 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 PSMC1P62191 440 aaKnown RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 SGSM1Q2NKQ1 1148 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 UVSSAQ2YD98 709 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 INTS6LQ5JSJ4 861 aaKnown RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 PPM1LQ5SGD2 360 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 TCERG1LQ5VWI1 586 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 CES5AQ6NT32 575 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 FAM171BQ6P995 826 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 SASS6Q6UVJ0 657 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 GRASPQ7Z6J2 395 aaPredicted RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 LMO3Q8TAP4 145 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 TATDN2Q93075 761 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 TWNKQ96RR1 684 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 OXCT2Q9BYC2 517 aaPredicted RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 DNMT3BQ9UBC3 853 aaKnown RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 GTF3C4Q9UKN8 822 aa14.03□□□□□ -0.16
TPM3-216ENST00000473036 PTPRZ1P23471 2315 aaPredicted RBP14.03□□□□□ -0.16
TPM3-216ENST00000473036 GREB1Q4ZG55 1949 aa14.02□□□□□ -0.16
TPM3-216ENST00000473036 HNRNPA1P09651 372 aaKnown RBP eCLIP14.02□□□□□ -0.17
TPM3-216ENST00000473036 ATF6P18850 670 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 CCR2P41597 374 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 MTHFRP42898 656 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 LHX1P48742 406 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 FMO5P49326 533 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 GPR15P49685 360 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 TNNC1P63316 161 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 NOP14P78316 857 aaKnown RBP14.02□□□□□ -0.17
TPM3-216ENST00000473036 TWF1Q12792 350 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 ORC1Q13415 861 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 SLC5A9Q2M3M2 681 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 ZNF667Q5HYK9 610 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 CT47A1Q5JQC4 288 aaPredicted RBP14.02□□□□□ -0.17
TPM3-216ENST00000473036 ATAT1Q5SQI0 421 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 LIN9Q5TKA1 542 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 HS6ST3Q8IZP7 471 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 THEM5Q8N1Q8 247 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 STKLD1Q8NE28 680 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 SPATA18Q8TC71 538 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 CNOT6LQ96LI5 555 aaKnown RBP14.02□□□□□ -0.17
TPM3-216ENST00000473036 ARID3AQ99856 593 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 LRRC3Q9BY71 257 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 BCO2Q9BYV7 579 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 METTL14Q9HCE5 456 aaKnown RBP14.02□□□□□ -0.17
TPM3-216ENST00000473036 WDR6Q9NNW5 1121 aaKnown RBP14.02□□□□□ -0.17
TPM3-216ENST00000473036 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 RAB20Q9NX57 234 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 DACH1Q9UI36 760 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 YIPF1Q9Y548 306 aa14.02□□□□□ -0.17
TPM3-216ENST00000473036 VPS13AQ96RL7 3174 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 C2CD4DB7Z1M9 353 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 PRRG1O14668 218 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 MOSPD3O75425 235 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 POU2F2P09086 479 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 ERCC5P28715 1186 aaPredicted RBP14.01□□□□□ -0.17
TPM3-216ENST00000473036 GNL1P36915 607 aaPredicted RBP14.01□□□□□ -0.17
TPM3-216ENST00000473036 CLCN5P51795 746 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 CACNA2D1P54289 1103 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 MYL7Q01449 175 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 KCNH2Q12809 1159 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 CCDC40Q4G0X9 1142 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 HSP90AA4PQ58FG1 418 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 FBXL13Q8NEE6 735 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 ITFG1Q8TB96 612 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 WHAMMQ8TF30 809 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 TAF4BQ92750 862 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 MYADMQ96S97 322 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 SYT15Q9BQS2 421 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 FUCA2Q9BTY2 467 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 SAMSN1Q9NSI8 373 aaKnown RBP14.01□□□□□ -0.17
TPM3-216ENST00000473036 DPP7Q9UHL4 492 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 USTQ9Y2C2 406 aa14.01□□□□□ -0.17
TPM3-216ENST00000473036 R3HCC1Q9Y3T6 440 aaKnown RBP14.01□□□□□ -0.17
TPM3-216ENST00000473036 CLUHO75153 1309 aa14□□□□□ -0.17
TPM3-216ENST00000473036 FAM186AA6NE01 2351 aa14□□□□□ -0.17
TPM3-216ENST00000473036 H0Y858 1186 aa14□□□□□ -0.17
TPM3-216ENST00000473036 PMM2O15305 246 aa14□□□□□ -0.17
TPM3-216ENST00000473036 FAM163BP0C2L3 166 aa14□□□□□ -0.17
TPM3-216ENST00000473036 CCDC192P0DO97 292 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms