RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 DDX42Q86XP3 938 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 NT5DC4Q86YG4 428 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 RHPN2Q8IUC4 686 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 RCOR2Q8IZ40 523 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 UBR7Q8N806 425 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 C3orf20Q8ND61 904 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 GPRC5AQ8NFJ5 357 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 EXD1Q8NHP7 514 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF606Q8WXB4 792 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 CPA5Q8WXQ8 436 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ARL8AQ96BM9 186 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 CYFIP2Q96F07 1278 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 C11orf70Q9BRQ4 267 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 TRIM51Q9BSJ1 452 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 FRMD8P1Q9BZ68 369 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 TRIM31Q9BZY9 425 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 INO80BQ9C086 356 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 PABPC3Q9H361 631 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ASB7Q9H672 318 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 APOBEC3GQ9HC16 384 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ERVK-5Q9HDB9 667 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ZDHHC18Q9NUE0 388 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 SLC5A4Q9NY91 659 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 DDX56Q9NY93 547 aaKnown RBP8.09□□□□□ -1.11
CCDC171-205ENST00000472806 WDR35Q9P2L0 1181 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 ATP8A1Q9Y2Q0 1164 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 TELO2Q9Y4R8 837 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 NUB1Q9Y5A7 615 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
CCDC171-205ENST00000472806 H0YGN5 161 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 EBAG9O00559 213 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 SOCS7O14512 581 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 FAM189A1O60320 539 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 LILRA1O75019 489 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 TJP3O95049 919 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ARIH2O95376 493 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 PGK2P07205 417 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 RARAP10276 462 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 RARGP13631 454 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 DESP17661 470 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 MMP8P22894 467 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 MARK3P27448 753 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CDH5P33151 784 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 MARCKSL1P49006 195 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 GTF2A2P52657 109 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 PLTPP55058 493 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 FKBP1BP68106 108 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 LACTBP83111 547 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 TFAMQ00059 246 aaKnown RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ZNF844Q08AG5 666 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 MAMLD1Q13495 774 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 PTK6Q13882 451 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 BYSLQ13895 437 aaKnown RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 UAP1Q16222 522 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CCNG2Q16589 344 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 HADHQ16836 314 aaKnown RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 HSDL1Q3SXM5 330 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 KRT71Q3SY84 523 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ZNF667Q5HYK9 610 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 SPOPLQ6IQ16 392 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 DCUN1D2Q6PH85 259 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ZNF365Q70YC5 407 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ARMCX2Q7L311 632 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ERICH1Q86X53 443 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CCDC50Q8IVM0 306 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 FBXO16Q8IX29 292 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CCDC89Q8N998 374 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 OR5B17Q8NGF7 314 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 PPTC7Q8NI37 304 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ART4Q93070 314 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 SNF8Q96H20 258 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CLMNQ96JQ2 1002 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 BTBD6Q96KE9 485 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 FGD4Q96M96 766 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 NLRP4Q96MN2 994 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 SCLT1Q96NL6 688 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 TMEM109Q9BVC6 243 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 TXLNGYQ9BZA5 131 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ROPN1BQ9BZX4 212 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 MTMR12Q9C0I1 747 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 HAPLN2Q9GZV7 340 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 NEUROG2Q9H2A3 272 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 LHX5Q9H2C1 402 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CENPHQ9H3R5 247 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ROPN1Q9HAT0 212 aaPredicted RBP8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CYP3A43Q9HB55 503 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ACP6Q9NPH0 428 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 CISHQ9NSE2 258 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 ASIC3Q9UHC3 531 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 SNX24Q9Y343 169 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 NFS1Q9Y697 457 aa8.08□□□□□ -1.12
CCDC171-205ENST00000472806 PTPRJQ12913 1337 aa8.07□□□□□ -1.12
CCDC171-205ENST00000472806 RBM47A0AV96 593 aaKnown RBP8.07□□□□□ -1.12
CCDC171-205ENST00000472806 RRN3P2A6NIE6 340 aa8.07□□□□□ -1.12
CCDC171-205ENST00000472806 ZBTB42B2RXF5 422 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms