RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ITPRIPL2Q3MIP1 535 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 TMEM196Q5HYL7 178 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 HAUS3Q68CZ6 603 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 OVOS1Q6IE37 1185 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 SLC39A4Q6P5W5 647 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 CCDC83Q8IWF9 413 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 STKLD1Q8NE28 680 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 DEFB124Q8NES8 71 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 C8orf76Q96K31 380 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 SENP8Q96LD8 212 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 PLIN2Q99541 437 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 TASP1Q9H6P5 420 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 PLEKHA5Q9HAU0 1116 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 THG1LQ9NWX6 298 aaKnown RBP10.12□□□□□ -0.79
VCL-204ENST00000472585 OBP2AQ9NY56 170 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
VCL-204ENST00000472585 MSRB2Q9Y3D2 182 aa10.12□□□□□ -0.79
VCL-204ENST00000472585 ASH1LQ9NR48 2969 aaKnown RBP10.12□□□□□ -0.79
VCL-204ENST00000472585 OR6C75A6NL08 312 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 PIRO00625 290 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 TRDMT1O14717 391 aaKnown RBP10.11□□□□□ -0.79
VCL-204ENST00000472585 CLDN3O15551 220 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 EGFP01133 1207 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 ARSAP15289 507 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 HMGA1P17096 107 aaKnown RBP10.11□□□□□ -0.79
VCL-204ENST00000472585 TYMPP19971 482 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 PI4KAP42356 2102 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 GALK1P51570 392 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 SLC12A3P55017 1021 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 PLD1Q13393 1074 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 MYBPC2Q14324 1141 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
VCL-204ENST00000472585 ARHGAP15Q53QZ3 475 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 SPATA1Q5VX52 437 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 C19orf48Q6RUI8 117 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 ZPBP2Q6X784 338 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 DSTYKQ6XUX3 929 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 CMTM8Q8IZV2 173 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 SYT2Q8N9I0 419 aaPredicted RBP10.11□□□□□ -0.79
VCL-204ENST00000472585 BPIFB1Q8TDL5 484 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 GIPC2Q8TF65 315 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 USP13Q92995 863 aaPredicted RBP10.11□□□□□ -0.79
VCL-204ENST00000472585 DRC1Q96MC2 740 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 HHIPQ96QV1 700 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 ZCWPW1Q9H0M4 648 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 IKZF4Q9H2S9 585 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 C17orf75Q9HAS0 396 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 TMLHEQ9NVH6 421 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 UBQLN1Q9UMX0 589 aaKnown RBP10.11□□□□□ -0.79
VCL-204ENST00000472585 ASB3Q9Y575 518 aa10.11□□□□□ -0.79
VCL-204ENST00000472585 CACNA1EQ15878 2313 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 ANO9A1A5B4 782 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 TISP43B9A030 160 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 ZIC2O95409 532 aaPredicted RBP10.1□□□□□ -0.79
VCL-204ENST00000472585 F11P03951 625 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 CYP11A1P05108 521 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 NFICP08651 508 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 TRAPPC10P48553 1259 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 GPR15P49685 360 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 NCKAP1LP55160 1127 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 AMPD2Q01433 879 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 SLC39A12Q504Y0 691 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 SOWAHCQ53LP3 525 aaPredicted RBP10.1□□□□□ -0.79
VCL-204ENST00000472585 HYIQ5T013 277 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 C9orf57Q5W0N0 161 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 JADE1Q6IE81 842 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 USP37Q86T82 979 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 PDZD3Q86UT5 571 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 C11orf74Q86VG3 221 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 FIZ1Q96SL8 496 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 OXCT2Q9BYC2 517 aaPredicted RBP10.1□□□□□ -0.79
VCL-204ENST00000472585 EBF3Q9H4W6 596 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.1□□□□□ -0.79
VCL-204ENST00000472585 KLK13Q9UKR3 277 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 CITO14578 2027 aa10.1□□□□□ -0.79
VCL-204ENST00000472585 ACACAQ13085 2346 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 ANKRD63C9JTQ0 380 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 H0Y626 953 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 CDX4O14627 284 aaPredicted RBP10.09□□□□□ -0.79
VCL-204ENST00000472585 RNF40O75150 1001 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 TRIM16O95361 564 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 APBB3O95704 486 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 FGF19O95750 216 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 MCM2P49736 904 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 DGKEP52429 567 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 WNT7BP56706 349 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 NLRP12P59046 1061 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 SIM1P81133 766 aaPredicted RBP10.09□□□□□ -0.79
VCL-204ENST00000472585 LMAN2Q12907 356 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 STRN3Q13033 797 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 RUNX3Q13761 415 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
VCL-204ENST00000472585 CCDC142Q17RM4 750 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 USP39Q53GS9 565 aaKnown RBP10.09□□□□□ -0.79
VCL-204ENST00000472585 SDHAF4Q5VUM1 108 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 TXNDC8Q6A555 127 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 MAB21L3Q8N8X9 362 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms