RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
SPC25-203ENST00000472216 CADM4Q8NFZ8 388 aa10.76□□□□□ -0.69
SPC25-203ENST00000472216 C9orf43Q8TAL5 461 aaPredicted RBP10.76□□□□□ -0.69
SPC25-203ENST00000472216 SSH1Q8WYL5 1049 aa10.76□□□□□ -0.69
SPC25-203ENST00000472216 PAAF1Q9BRP4 392 aa10.76□□□□□ -0.69
SPC25-203ENST00000472216 FDXACB1Q9BRP7 624 aaPredicted RBP10.76□□□□□ -0.69
SPC25-203ENST00000472216 LRRC3Q9BY71 257 aa10.76□□□□□ -0.69
SPC25-203ENST00000472216 SMG9Q9H0W8 520 aaKnown RBP10.76□□□□□ -0.69
SPC25-203ENST00000472216 NAPBQ9H115 298 aa10.76□□□□□ -0.69
SPC25-203ENST00000472216 TASP1Q9H6P5 420 aa10.76□□□□□ -0.69
SPC25-203ENST00000472216 CDRT15L2A8MXV6 281 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 TRIM6-TRIM34B2RNG4 842 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 PPP1R11O60927 126 aaPredicted RBP10.75□□□□□ -0.69
SPC25-203ENST00000472216 ADAM23O75077 832 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 PRKCBP05771 671 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 ITGAVP06756 1048 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 NCAM1P13591 858 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 ATP4AP20648 1035 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 CYP4F2P78329 520 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 GRIK3Q13003 919 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 USP4Q13107 963 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 ASPRV1Q53RT3 343 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 C3orf38Q5JPI3 329 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 UBXN11Q5T124 520 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 TPGS2Q68CL5 300 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 SP5Q6BEB4 398 aaPredicted RBP10.75□□□□□ -0.69
SPC25-203ENST00000472216 GDF7Q7Z4P5 450 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 ARL14Q8N4G2 192 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 EID2Q8N6I1 236 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 SMG8Q8ND04 991 aaKnown RBP10.75□□□□□ -0.69
SPC25-203ENST00000472216 LRRN4CLQ8ND94 238 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 HPS3Q969F9 1004 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 CACNG4Q9UBN1 327 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 SATB2Q9UPW6 733 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 NOP58Q9Y2X3 529 aaKnown RBP10.75□□□□□ -0.69
SPC25-203ENST00000472216 GIT1Q9Y2X7 761 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 IPPQ9Y573 584 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
SPC25-203ENST00000472216 ZBTB5O15062 677 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 SNPHO15079 494 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 GPAA1O43292 621 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 HDAC4P56524 1084 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 CTDSPL2Q05D32 466 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 DCAF12L1Q5VU92 463 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 EGFLAMQ63HQ2 1017 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 CCDC60Q8IWA6 550 aaPredicted RBP10.74□□□□□ -0.69
SPC25-203ENST00000472216 ATP2A3Q93084 1043 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 GPATCH3Q96I76 525 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 LY9Q9HBG7 655 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 TOMM22Q9NS69 142 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 EIF2B4Q9UI10 523 aaKnown RBP10.74□□□□□ -0.69
SPC25-203ENST00000472216 MAFFQ9ULX9 164 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 NUP210Q8TEM1 1887 aaPredicted RBP10.74□□□□□ -0.69
SPC25-203ENST00000472216 ACANP16112 2415 aa10.74□□□□□ -0.69
SPC25-203ENST00000472216 DCHS2Q6V1P9 2916 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 CYP26A1O43174 497 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 ORC4O43929 436 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 CSO75390 466 aaKnown RBP10.73□□□□□ -0.69
SPC25-203ENST00000472216 ABCB4P21439 1286 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 CD6P30203 668 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 BFSP1Q12934 665 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 TUSC3Q13454 348 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 EIF2S3LQ2VIR3 472 aaKnown RBP10.73□□□□□ -0.69
SPC25-203ENST00000472216 SWSAP1Q6NVH7 229 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 ABHD15Q6UXT9 468 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 GAREM2Q75VX8 874 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 PRIMA1Q86XR5 153 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 GSTCDQ8NEC7 633 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 C1orf216Q8TAB5 229 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 SSH3Q8TE77 659 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 ERRFI1Q9UJM3 462 aaPredicted RBP10.73□□□□□ -0.69
SPC25-203ENST00000472216 UBIAD1Q9Y5Z9 338 aa10.73□□□□□ -0.69
SPC25-203ENST00000472216 TDRD15B5MCY1 1934 aaKnown RBP10.73□□□□□ -0.69
SPC25-203ENST00000472216 A0A1B0GTQ1 180 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 CASTOR2A6NHX0 329 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 METTL12A8MUP2 240 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 ACP1P24666 158 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 SLC6A4P31645 630 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 GRIN1Q05586 938 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 SRSF6Q13247 344 aaKnown RBP10.72□□□□□ -0.69
SPC25-203ENST00000472216 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
SPC25-203ENST00000472216 EMC10Q5UCC4 262 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 CDCP2Q5VXM1 449 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 CLEC14AQ86T13 490 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 ZNF410Q86VK4 478 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 PRR7Q8TB68 274 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 HTR3CQ8WXA8 447 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 TCTN2Q96GX1 697 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 GPR174Q9BXC1 333 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 ANO2Q9NQ90 1003 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 DUS2Q9NX74 493 aaKnown RBP10.72□□□□□ -0.69
SPC25-203ENST00000472216 PCDHGA8Q9Y5G5 932 aa10.72□□□□□ -0.69
SPC25-203ENST00000472216 SIX3O95343 332 aaPredicted RBP10.71□□□□□ -0.69
SPC25-203ENST00000472216 GABRR2P28476 465 aa10.71□□□□□ -0.69
SPC25-203ENST00000472216 AVPR1AP37288 418 aa10.71□□□□□ -0.69
SPC25-203ENST00000472216 MLLT3P42568 568 aaPredicted RBP10.71□□□□□ -0.69
SPC25-203ENST00000472216 EPHB3P54753 998 aa10.71□□□□□ -0.69
SPC25-203ENST00000472216 PLD1Q13393 1074 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms