RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SLC46A2Q9BY10 475 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 C8orf33Q9H7E9 229 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-213ENST00000471978 PRMT8Q9NR22 394 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-213ENST00000471978 HSPBP1Q9NZL4 362 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 PCDHGA2Q9Y5H1 932 aa24.22■■□□□ 1.47
C9orf3-213ENST00000471978 PTPRJQ12913 1337 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 SLC38A8A6NNN8 435 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 POLR2DO15514 142 aaKnown RBP24.21■■□□□ 1.47
C9orf3-213ENST00000471978 F13A1P00488 732 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 TNNC2P02585 160 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 HMGA1P17096 107 aaKnown RBP24.21■■□□□ 1.47
C9orf3-213ENST00000471978 MYO1EQ12965 1108 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 SURF1Q15526 300 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 INTS6LQ5JSJ4 861 aaKnown RBP24.21■■□□□ 1.47
C9orf3-213ENST00000471978 FAM26FQ5R3K3 315 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 EPM2AIP1Q7L775 607 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-213ENST00000471978 OSTM1Q86WC4 334 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 ADGRF2Q8IZF7 708 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 TOP6BLQ8N6T0 577 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 OR5B17Q8NGF7 314 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 ZNF507Q8TCN5 953 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 LEO1Q8WVC0 666 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-213ENST00000471978 ZSCAN32Q9NX65 697 aa24.21■■□□□ 1.47
C9orf3-213ENST00000471978 NUP210Q8TEM1 1887 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-213ENST00000471978 SOX9P48436 509 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 LHX1P48742 406 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 GPR15P49685 360 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 DUOXA2Q1HG44 320 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 C1orf228Q6PIY5 440 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 TMEM150AQ86TG1 271 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 SUMF1Q8NBK3 374 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 ZBTB44Q8NCP5 570 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 TTC8Q8TAM2 541 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 SPATA18Q8TC71 538 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 BPIFB1Q8TDL5 484 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 IER2Q9BTL4 223 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 SMG9Q9H0W8 520 aaKnown RBP24.2■■□□□ 1.46
C9orf3-213ENST00000471978 MAGEF1Q9HAY2 307 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 KIAA1586Q9HCI6 787 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 ABCB6Q9NP58 842 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 GTSE1Q9NYZ3 720 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 ZMYM5Q9UJ78 669 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 GTF3C4Q9UKN8 822 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 DCHS1Q96JQ0 3298 aa24.2■■□□□ 1.46
C9orf3-213ENST00000471978 OTOGLQ3ZCN5 2332 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 F11P03951 625 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 CHRNB1P11230 501 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 CYP2F1P24903 491 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 ME1P48163 572 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 NLRP12P59046 1061 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 SOWAHAQ2M3V2 549 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 SDHAF4Q5VUM1 108 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 MAMSTRQ6ZN01 415 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 UNC13DQ70J99 1090 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 CMTM8Q8IZV2 173 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 CELF5Q8N6W0 485 aaKnown RBP24.19■■□□□ 1.46
C9orf3-213ENST00000471978 STKLD1Q8NE28 680 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 RUBCNQ92622 972 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 NELL1Q92832 810 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 HPDLQ96IR7 371 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 PKMYT1Q99640 499 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 PCDHA7Q9UN72 937 aa24.19■■□□□ 1.46
C9orf3-213ENST00000471978 MAGED2Q9UNF1 606 aaPredicted RBP24.19■■□□□ 1.46
C9orf3-213ENST00000471978 MYBPHLA2RUH7 354 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 SPECC1L-ADORA2AF8WAN1 911 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 GABRDO14764 452 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 TGFB1I1O43294 461 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 CSH1P0DML2 217 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 CSH2P0DML3 217 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 PCSK1P29120 753 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 AVPR1AP37288 418 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 RPL10AP62906 217 aaKnown RBP24.18■■□□□ 1.46
C9orf3-213ENST00000471978 PLCB2Q00722 1185 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 DDR2Q16832 855 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 WDR49Q8IV35 697 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 NELFCDQ8IXH7 590 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 MAB21L3Q8N8X9 362 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 RDH13Q8NBN7 331 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 FAM126AQ9BYI3 521 aaPredicted RBP24.18■■□□□ 1.46
C9orf3-213ENST00000471978 BLZF1Q9H2G9 400 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 AGPAT3Q9NRZ7 376 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 THG1LQ9NWX6 298 aaKnown RBP24.18■■□□□ 1.46
C9orf3-213ENST00000471978 FAM13BQ9NYF5 915 aa24.18■■□□□ 1.46
C9orf3-213ENST00000471978 UBE4BO95155 1302 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 HCRTO43612 131 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 DDX6P26196 483 aaKnown RBP eCLIP24.17■■□□□ 1.46
C9orf3-213ENST00000471978 CASP1P29466 404 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 CTHP32929 405 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 LRRC32Q14392 662 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 PPP2R5DQ14738 602 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 SNRNP35Q16560 246 aaKnown RBP24.17■■□□□ 1.46
C9orf3-213ENST00000471978 CCDC142Q17RM4 750 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 DPH6Q7L8W6 267 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 RALGPS2Q86X27 583 aaPredicted RBP24.17■■□□□ 1.46
C9orf3-213ENST00000471978 SPATA2LQ8IUW3 424 aaPredicted RBP24.17■■□□□ 1.46
C9orf3-213ENST00000471978 KIAA2013Q8IYS2 634 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 SCFD1Q8WVM8 642 aa24.17■■□□□ 1.46
C9orf3-213ENST00000471978 GPR179Q6PRD1 2367 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.16■■□□□ 1.46
C9orf3-213ENST00000471978 CLIC2O15247 247 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms