RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MAB21L3Q8N8X9 362 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 ZBTB44Q8NCP5 570 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 FAM200AQ8TCP9 573 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 FAM3CQ92520 227 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
USP48-207ENST00000471752 OSBPL6Q9BZF3 934 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 TRIM9Q9C026 710 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 LINC00597Q9H2U6 94 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PARD6AQ9NPB6 346 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 CRTAC1Q9NQ79 661 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 HPS4Q9NQG7 708 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 OLFML3Q9NRN5 406 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 RBAKQ9NYW8 714 aaPredicted RBP8.7□□□□□ -1.02
USP48-207ENST00000471752 MAFFQ9ULX9 164 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 PCDHA7Q9UN72 937 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 MAGED2Q9UNF1 606 aaPredicted RBP8.7□□□□□ -1.02
USP48-207ENST00000471752 ZDHHC9Q9Y397 364 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 SNX9Q9Y5X1 595 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 TPRP12270 2363 aaKnown RBP8.7□□□□□ -1.02
USP48-207ENST00000471752 FRYQ5TBA9 3013 aa8.7□□□□□ -1.02
USP48-207ENST00000471752 SPECC1L-ADORA2AF8WAN1 911 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 SCAMP3O14828 347 aaKnown RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 POLR2DO15514 142 aaKnown RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 XPOTO43592 962 aaKnown RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 HRO43593 1189 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 LILRB5O75023 590 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 PRPF40AO75400 957 aaKnown RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 IL18RAPO95256 599 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 KRT19P08727 400 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 GARTP22102 1010 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 AFMP43652 599 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 NLRP12P59046 1061 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 EHHADHQ08426 723 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 SCFD1Q8WVM8 642 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 EZH1Q92800 747 aaPredicted RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 DNASE1L2Q92874 299 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 IRF7Q92985 503 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 FAM83CQ9BQN1 747 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 MRPL45Q9BRJ2 306 aaKnown RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 CHRDQ9H2X0 955 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 TASP1Q9H6P5 420 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 SLC39A2Q9NP94 309 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 PRMT8Q9NR22 394 aaPredicted RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 GKN1Q9NS71 199 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 INTS13Q9NVM9 706 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 DDX43Q9NXZ2 648 aaKnown RBP8.69□□□□□ -1.02
USP48-207ENST00000471752 HSPBP1Q9NZL4 362 aa8.69□□□□□ -1.02
USP48-207ENST00000471752 COL4A2P08572 1712 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 MED19A0JLT2 244 aaPredicted RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 C2orf78A6NCI8 922 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 CHURC1-FNTBB4DL54 471 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 K7ESF4 209 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 GABRDO14764 452 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 CHADO15335 359 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 KLRC4O43908 158 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 RPS9P46781 194 aaKnown RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 ID4P47928 161 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 FNTBP49356 437 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 TUFMP49411 452 aaKnown RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 PGFP49763 221 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 CYP2J2P51589 502 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 KPNA1P52294 538 aaPredicted RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 ASIC1P78348 528 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 DNM1Q05193 864 aaKnown RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 MESP2Q0VG99 397 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 POSTNQ15063 836 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 HEATR6Q6AI08 1181 aaKnown RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 METTL23Q86XA0 190 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 SFTPA1Q8IWL2 248 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 CMTM8Q8IZV2 173 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 THEM5Q8N1Q8 247 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 GPD1LQ8N335 351 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 TTC16Q8NEE8 873 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 ZNF507Q8TCN5 953 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 CCDC127Q96BQ5 260 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 HVCN1Q96D96 273 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 HPDLQ96IR7 371 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 TSPAN18Q96SJ8 248 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 C7orf25Q9BPX7 421 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 DPEP3Q9H4B8 488 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 ZSCAN16Q9H4T2 348 aaPredicted RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 EBF3Q9H4W6 596 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 TRPV5Q9NQA5 729 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 ZSCAN32Q9NX65 697 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 GDAP2Q9NXN4 497 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 SEL1LQ9UBV2 794 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 FBXO4Q9UKT5 387 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 ASB3Q9Y575 518 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 PCDHB5Q9Y5E4 795 aa8.68□□□□□ -1.02
USP48-207ENST00000471752 MORC2Q9Y6X9 1032 aaPredicted RBP8.68□□□□□ -1.02
USP48-207ENST00000471752 CLDN5O00501 218 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 ACACBO00763 2458 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 CUTAO60888 179 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 HUS1O60921 280 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 F13A1P00488 732 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 ZSCAN22P10073 491 aaPredicted RBP8.67□□□□□ -1.02
USP48-207ENST00000471752 SCP2P22307 547 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 BDNFP23560 247 aa8.67□□□□□ -1.02
USP48-207ENST00000471752 CTHP32929 405 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms