RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 CASQ2O14958 399 aaPredicted RBP11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 TNFAIP8O95379 198 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 SCG2P13521 617 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 GNA11P29992 359 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 CDK9P50750 372 aaKnown RBP11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 DMPKQ09013 629 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 DCLRE1AQ6PJP8 1040 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 SRRM1Q8IYB3 904 aaKnown RBP11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 KIAA0895Q8NCT3 520 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 EYA3Q99504 573 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
CHMP2B-203ENST00000471660 NCANO14594 1321 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 TSPY2A6NKD2 308 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 TMEM114B3SHH9 223 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 OCM2P0CE71 109 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 OCMP0CE72 109 aaPredicted RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 ESRRAP11474 423 aaPredicted RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PLA2G5P39877 138 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PRKCIP41743 596 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 IRX4P78413 519 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SPCS2Q15005 226 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 CYP1B1Q16678 543 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 C6orf183Q5T699 404 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 RASAL3Q86YV0 1011 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 U2AF1L4Q8WU68 220 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 CHPT1Q8WUD6 406 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 FAM161BQ96MY7 647 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 S100A14Q9HCY8 104 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PALMDQ9NP74 551 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 RRN3Q9NYV6 651 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 WHRNQ9P202 907 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 RSL24D1Q9UHA3 163 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PLA2G4CQ9UP65 541 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 CFAP69A5D8W1 941 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 TTC34A8MYJ7 566 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 ADCY6O43306 1168 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SLC26A4O43511 780 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PABPC1P11940 636 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 CDH3P22223 829 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 CETN2P41208 172 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 AQP4P55087 323 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PTK2Q05397 1052 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SEPT6Q14141 434 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 CNGA3Q16281 694 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 KCTD19Q17RG1 926 aaPredicted RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PLEKHG4Q58EX7 1191 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 ALKBH5Q6P6C2 394 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 RHBDF2Q6PJF5 856 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 IRF2BP2Q7Z5L9 587 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 CABP7Q86V35 215 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 WDR75Q8IWA0 830 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SLC7A5P1Q8MH63 180 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SPOCK2Q92563 424 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 MAML1Q92585 1016 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 GPATCH1Q9BRR8 931 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 LSM14BQ9BX40 385 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 GANQ9H2C0 597 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 RIC8AQ9NPQ8 531 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 MCM9Q9NXL9 1143 aa11.28□□□□□ -0.6
CHMP2B-203ENST00000471660 SYNGAP1Q96PV0 1343 aa11.27□□□□□ -0.6
CHMP2B-203ENST00000471660 FUCA1P04066 466 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 H2AFZP0C0S5 128 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 MYCLP1P12525 358 aaPredicted RBP11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 PRDX5P30044 214 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 RHBDL3P58872 404 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 STAT4Q14765 748 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 C16orf72Q14CZ0 275 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 H2AFVQ71UI9 128 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 TMC7Q7Z402 723 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 C18orf8Q96DM3 657 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 TTC1Q99614 292 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 CTRCQ99895 268 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 LBHD1Q9BQE6 289 aaPredicted RBP11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 MRPL1Q9BYD6 325 aaKnown RBP11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 TRIM55Q9BYV6 548 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 GRIP2Q9C0E4 1043 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 KLC2Q9H0B6 622 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 ARHGEF4Q9NR80 690 aa11.27□□□□□ -0.61
CHMP2B-203ENST00000471660 SLC38A7Q9NVC3 462 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms