RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 DDX17Q92841 729 aaKnown RBP4.93□□□□□ -1.62
RBM39-228ENST00000471635 SLC46A1Q96NT5 459 aa4.93□□□□□ -1.62
RBM39-228ENST00000471635 PCDH12Q9NPG4 1184 aa4.93□□□□□ -1.62
RBM39-228ENST00000471635 SERTAD4Q9NUC0 356 aa4.93□□□□□ -1.62
RBM39-228ENST00000471635 PNPOQ9NVS9 261 aa4.93□□□□□ -1.62
RBM39-228ENST00000471635 POU2F2P09086 479 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 CLCN2P51788 898 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 ZNF134P52741 427 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 SLC10A2Q12908 348 aaPredicted RBP4.92□□□□□ -1.62
RBM39-228ENST00000471635 LLGL1Q15334 1064 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 PGS1Q32NB8 556 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 TEDDM1Q5T9Z0 273 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 KIAA1614Q5VZ46 1190 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 FAM160B1Q5W0V3 765 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 ZNF366Q8N895 744 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 VGLL2Q8N8G2 317 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 SEMA6DQ8NFY4 1073 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 GTPBP4Q9BZE4 634 aaKnown RBP4.92□□□□□ -1.62
RBM39-228ENST00000471635 SH3BP4Q9P0V3 963 aa4.92□□□□□ -1.62
RBM39-228ENST00000471635 LUC7L2Q9Y383 392 aaKnown RBP4.92□□□□□ -1.62
RBM39-228ENST00000471635 TARM1B6A8C7 271 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 H3BUI4 141 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 FAM163BP0C2L3 166 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 PIM1P11309 404 aaPredicted RBP4.91□□□□□ -1.62
RBM39-228ENST00000471635 HDCP19113 662 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 ALDH9A1P49189 494 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 TMEM240Q5SV17 173 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 ZNF618Q5T7W0 954 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 CEP85Q6P2H3 762 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 LAYNQ6UX15 382 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 MAVSQ7Z434 540 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 ZBTB46Q86UZ6 589 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.91□□□□□ -1.62
RBM39-228ENST00000471635 BRIX1Q8TDN6 353 aaKnown RBP4.91□□□□□ -1.62
RBM39-228ENST00000471635 HSPBAP1Q96EW2 488 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 FAM167AQ96KS9 214 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 C1QTNF7Q9BXJ2 289 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 HOMER2Q9NSB8 354 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 FLRT1Q9NZU1 646 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 HESX1Q9UBX0 185 aa4.91□□□□□ -1.62
RBM39-228ENST00000471635 ZNF70Q9UC06 446 aaPredicted RBP4.91□□□□□ -1.62
RBM39-228ENST00000471635 H0YIZ8 118 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 SMIM22K7EJ46 135 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 DCLK1O15075 740 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 DNAJB5O75953 348 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 LIPAP38571 399 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 SP2Q02086 613 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 PLS1Q14651 629 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 BRDTQ58F21 947 aaPredicted RBP4.9□□□□□ -1.63
RBM39-228ENST00000471635 ICE2Q659A1 982 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 SLC29A4Q7RTT9 530 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 C1QL2Q7Z5L3 287 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
RBM39-228ENST00000471635 FANCBQ8NB91 859 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 NELL2Q99435 816 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 SERTAD3Q9UJW9 196 aa4.9□□□□□ -1.63
RBM39-228ENST00000471635 SLC16A3O15427 465 aaKnown RBP4.89□□□□□ -1.63
RBM39-228ENST00000471635 JTBO76095 146 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 UNC5CO95185 931 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 PRR35P0CG20 571 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 CYP2C18P33260 490 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 KCNJ5P48544 419 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 SOX8P57073 446 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 LOXL3P58215 753 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 LILRA4P59901 499 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 PROSER3Q2NL68 480 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 LONRF3Q496Y0 759 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 MTX3Q5HYI7 312 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 TREML2Q5T2D2 321 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 ARHGAP40Q5TG30 622 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 SFRP4Q6FHJ7 346 aaPredicted RBP4.89□□□□□ -1.63
RBM39-228ENST00000471635 ANKRD16Q6P6B7 361 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 DTX2Q86UW9 622 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 CHMP4CQ96CF2 233 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 MVB12AQ96EY5 273 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 SLC35A4Q96G79 324 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 PCDHA6Q9UN73 950 aa4.89□□□□□ -1.63
RBM39-228ENST00000471635 QSOX1O00391 747 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 ZNF213O14771 459 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 TLR5O60602 858 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 ATXN1LP0C7T5 689 aaKnown RBP4.88□□□□□ -1.63
RBM39-228ENST00000471635 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
RBM39-228ENST00000471635 ENGP17813 658 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 MPGP29372 298 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 PXNP49023 591 aaPredicted RBP4.88□□□□□ -1.63
RBM39-228ENST00000471635 EEFSECP57772 596 aaKnown RBP4.88□□□□□ -1.63
RBM39-228ENST00000471635 NKX6-1P78426 367 aaPredicted RBP4.88□□□□□ -1.63
RBM39-228ENST00000471635 IQCB1Q15051 598 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 AARS2Q5JTZ9 985 aaKnown RBP4.88□□□□□ -1.63
RBM39-228ENST00000471635 ZNF425Q6IV72 752 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 ZNF66Q6ZN08 573 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 LRRC71Q8N4P6 559 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 CELF5Q8N6W0 485 aaKnown RBP4.88□□□□□ -1.63
RBM39-228ENST00000471635 TBC1D5Q92609 795 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 REPS1Q96D71 796 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 DLL3Q9NYJ7 618 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 ZNF804BA4D1E1 1349 aa4.88□□□□□ -1.63
RBM39-228ENST00000471635 FESP07332 822 aa4.87□□□□□ -1.63
RBM39-228ENST00000471635 GRPP07492 148 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms