RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 SMG7Q92540 1137 aaKnown RBP26.9■■□□□ 1.9
COL15A1-203ENST00000471477 SLC27A5Q9Y2P5 690 aa26.9■■□□□ 1.9
COL15A1-203ENST00000471477 ZNF165P49910 485 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 NFE2Q16621 373 aaPredicted RBP26.89■■□□□ 1.89
COL15A1-203ENST00000471477 MIIPQ5JXC2 388 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 FAM171BQ6P995 826 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 SPPL2BQ8TCT7 592 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 C2orf15Q8WU43 125 aaKnown RBP26.89■■□□□ 1.89
COL15A1-203ENST00000471477 FAXDC2Q96IV6 333 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 ARID3AQ99856 593 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 GCNT4Q9P109 453 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 HMGXB4Q9UGU5 601 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 FAM50BQ9Y247 325 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 YIPF1Q9Y548 306 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 PCDHB5Q9Y5E4 795 aa26.89■■□□□ 1.89
COL15A1-203ENST00000471477 LRG1P02750 347 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 CD58P19256 250 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 NDST1P52848 882 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 CBX2Q14781 532 aaPredicted RBP26.88■■□□□ 1.89
COL15A1-203ENST00000471477 SMAD2Q15796 467 aaKnown RBP26.88■■□□□ 1.89
COL15A1-203ENST00000471477 VWA3BQ502W6 1294 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 EHBP1Q8NDI1 1231 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 RIPOR3Q96MK2 946 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 NT5C1BQ96P26 610 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 LPIN3Q9BQK8 851 aa26.88■■□□□ 1.89
COL15A1-203ENST00000471477 INTS2Q9H0H0 1204 aaKnown RBP26.88■■□□□ 1.89
COL15A1-203ENST00000471477 MTHFRP42898 656 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 INCA1Q0VD86 236 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 TWF1Q12792 350 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 ORC1Q13415 861 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 MDH1BQ5I0G3 518 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 ATAT1Q5SQI0 421 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 DHX40Q8IX18 779 aaKnown RBP26.87■■□□□ 1.89
COL15A1-203ENST00000471477 B3GALNT2Q8NCR0 500 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 MYLPFQ96A32 169 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 SEPT5Q99719 369 aaPredicted RBP26.87■■□□□ 1.89
COL15A1-203ENST00000471477 CRACR2AQ9BSW2 395 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 RHOBTB2Q9BYZ6 727 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 HSD3B7Q9H2F3 369 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 NDST4Q9H3R1 872 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 PIDD1Q9HB75 910 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 TAB2Q9NYJ8 693 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 HSFX1Q9UBD0 423 aa26.87■■□□□ 1.89
COL15A1-203ENST00000471477 XYLBO75191 536 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 SOAT2O75908 522 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 BMP1P13497 986 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 PTPN1P18031 435 aaKnown RBP26.86■■□□□ 1.89
COL15A1-203ENST00000471477 CUL2Q13617 745 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 KRT31Q15323 416 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 MGAT5BQ3V5L5 792 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 CYP26C1Q6V0L0 522 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 UNC93AQ86WB7 457 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 SPATA2LQ8IUW3 424 aaPredicted RBP26.86■■□□□ 1.89
COL15A1-203ENST00000471477 MYCBPAPQ8TBZ2 947 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 POMKQ9H5K3 350 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 NOTCH4Q99466 2003 aa26.86■■□□□ 1.89
COL15A1-203ENST00000471477 PES1O00541 588 aaKnown RBP26.85■■□□□ 1.89
COL15A1-203ENST00000471477 POU2F2P09086 479 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 MAPRE1Q15691 268 aaKnown RBP26.85■■□□□ 1.89
COL15A1-203ENST00000471477 GBP6Q6ZN66 633 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 C4orf50Q6ZRC1 276 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 ACOT1Q86TX2 421 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 PCED1BQ96HM7 432 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 TNIP3Q96KP6 325 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 NECTIN4Q96NY8 510 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 TWNKQ96RR1 684 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 CISHQ9NSE2 258 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 MYH10P35580 1976 aa26.85■■□□□ 1.89
COL15A1-203ENST00000471477 GTPBP10A4D1E9 387 aaKnown RBP26.84■■□□□ 1.89
COL15A1-203ENST00000471477 SMTNL1A8MU46 457 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 CILPO75339 1184 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 HAPLN1P10915 354 aaPredicted RBP26.84■■□□□ 1.89
COL15A1-203ENST00000471477 ZNF18P17022 549 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 TBXAS1P24557 533 aaPredicted RBP26.84■■□□□ 1.89
COL15A1-203ENST00000471477 CYP27A1Q02318 531 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 ARHGEF19Q8IW93 802 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 PPM1KQ8N3J5 372 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 ABCB6Q9NP58 842 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 VCANP13611 3396 aa26.84■■□□□ 1.89
COL15A1-203ENST00000471477 CYP2F1P24903 491 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 ALDH1A3P47895 512 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 TUFMP49411 452 aaKnown RBP26.83■■□□□ 1.89
COL15A1-203ENST00000471477 PLD1Q13393 1074 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 IQCB1Q15051 598 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 EXOC3L4Q17RC7 722 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 CFAP221Q4G0U5 840 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 GRASPQ7Z6J2 395 aaPredicted RBP26.83■■□□□ 1.89
COL15A1-203ENST00000471477 WHAMMQ8TF30 809 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 FUBP3Q96I24 572 aaKnown RBP eCLIP26.83■■□□□ 1.89
COL15A1-203ENST00000471477 NT5C1AQ9BXI3 368 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 VPS16Q9H269 839 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 HCFC1R1Q9NWW0 138 aa26.83■■□□□ 1.89
COL15A1-203ENST00000471477 SLC9A1P19634 815 aa26.82■■□□□ 1.88
COL15A1-203ENST00000471477 TRIM65Q6PJ69 517 aa26.82■■□□□ 1.88
COL15A1-203ENST00000471477 RRAGAQ7L523 313 aa26.82■■□□□ 1.88
COL15A1-203ENST00000471477 TTC39CQ8N584 583 aa26.82■■□□□ 1.88
COL15A1-203ENST00000471477 ANKRD20A12PQ8NF67 263 aa26.82■■□□□ 1.88
COL15A1-203ENST00000471477 KAT5Q92993 513 aa26.82■■□□□ 1.88
COL15A1-203ENST00000471477 ELOVL4Q9GZR5 314 aa26.82■■□□□ 1.88
COL15A1-203ENST00000471477 CBX8Q9HC52 389 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms