RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 WDR44Q5JSH3 913 aa18.93■□□□□ 0.62
VPS72-204ENST00000471423 RPGRIP1Q96KN7 1286 aa18.93■□□□□ 0.62
VPS72-204ENST00000471423 DNAJC25Q9H1X3 360 aa18.93■□□□□ 0.62
VPS72-204ENST00000471423 WDR6Q9NNW5 1121 aaKnown RBP18.93■□□□□ 0.62
VPS72-204ENST00000471423 CRTAC1Q9NQ79 661 aa18.93■□□□□ 0.62
VPS72-204ENST00000471423 HCFC1R1Q9NWW0 138 aa18.93■□□□□ 0.62
VPS72-204ENST00000471423 HMGXB4Q9UGU5 601 aa18.93■□□□□ 0.62
VPS72-204ENST00000471423 MUC3AQ02505 3323 aa18.93■□□□□ 0.62
VPS72-204ENST00000471423 PMM2O15305 246 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 MTIF2P46199 727 aaKnown RBP18.92■□□□□ 0.62
VPS72-204ENST00000471423 MDH1BQ5I0G3 518 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 FAM171BQ6P995 826 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 SPATA2LQ8IUW3 424 aaPredicted RBP18.92■□□□□ 0.62
VPS72-204ENST00000471423 FAM114A1Q8IWE2 563 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 MYLPFQ96A32 169 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 LPIN3Q9BQK8 851 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 COL25A1Q9BXS0 654 aaPredicted RBP18.92■□□□□ 0.62
VPS72-204ENST00000471423 SAMSN1Q9NSI8 373 aaKnown RBP18.92■□□□□ 0.62
VPS72-204ENST00000471423 CEP72Q9P209 647 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 DNMT3BQ9UBC3 853 aaKnown RBP18.92■□□□□ 0.62
VPS72-204ENST00000471423 HSFX1Q9UBD0 423 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 NFE2L3Q9Y4A8 694 aa18.92■□□□□ 0.62
VPS72-204ENST00000471423 P4HA2O15460 535 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 PTPN1P18031 435 aaKnown RBP18.91■□□□□ 0.62
VPS72-204ENST00000471423 CD58P19256 250 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 ALDH1A3P47895 512 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 NDST1P52848 882 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 PLD1Q13393 1074 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 ORC1Q13415 861 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 MAPRE1Q15691 268 aaKnown RBP18.91■□□□□ 0.62
VPS72-204ENST00000471423 ELMOD1Q8N336 334 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 B3GALNT2Q8NCR0 500 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 MYCBPAPQ8TBZ2 947 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
VPS72-204ENST00000471423 TATDN2Q93075 761 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 ARID3AQ99856 593 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 CORO1BQ9BR76 489 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 CYP3A43Q9HB55 503 aa18.91■□□□□ 0.62
VPS72-204ENST00000471423 MAGEC2Q9UBF1 373 aaPredicted RBP18.91■□□□□ 0.62
VPS72-204ENST00000471423 TTC28Q96AY4 2481 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 C2CD4DB7Z1M9 353 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 HAPLN1P10915 354 aaPredicted RBP18.9■□□□□ 0.62
VPS72-204ENST00000471423 ATF6P18850 670 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 CYP2F1P24903 491 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 SSTR3P32745 418 aaPredicted RBP18.9■□□□□ 0.62
VPS72-204ENST00000471423 TUFMP49411 452 aaKnown RBP18.9■□□□□ 0.62
VPS72-204ENST00000471423 EPHB3P54753 998 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 CYP27A1Q02318 531 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 INCA1Q0VD86 236 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 CETN1Q12798 172 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 LRMPQ12912 555 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 CFAP221Q4G0U5 840 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 PABPC1LQ4VXU2 614 aaKnown RBP18.9■□□□□ 0.62
VPS72-204ENST00000471423 C4orf50Q6ZRC1 276 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 GET4Q7L5D6 327 aaPredicted RBP18.9■□□□□ 0.62
VPS72-204ENST00000471423 PCED1BQ96HM7 432 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 ABCB6Q9NP58 842 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 CD320Q9NPF0 282 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 NR2E1Q9Y466 385 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 DOCK6Q96HP0 2047 aa18.9■□□□□ 0.62
VPS72-204ENST00000471423 SYCE3A1L190 88 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 C19orf67A6NJJ6 358 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 KCNJ18B7U540 433 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 LOC730098B7Z3J9 87 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 RHOP08100 348 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 PTPN2P17706 415 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 FSHRP23945 695 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 GPR15P49685 360 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 KCNJ12Q14500 433 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 ANO6Q4KMQ2 910 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 IQCEQ6IPM2 695 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 ACOT1Q86TX2 421 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 UNC93AQ86WB7 457 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 GJD3Q8N144 294 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 TDRD5Q8NAT2 981 aaKnown RBP18.89■□□□□ 0.61
VPS72-204ENST00000471423 LMO3Q8TAP4 145 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 FUBP3Q96I24 572 aaKnown RBP eCLIP18.89■□□□□ 0.61
VPS72-204ENST00000471423 FAXDC2Q96IV6 333 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 TNIP3Q96KP6 325 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 ZNF512Q96ME7 567 aaPredicted RBP18.89■□□□□ 0.61
VPS72-204ENST00000471423 TWNKQ96RR1 684 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 USTQ9Y2C2 406 aa18.89■□□□□ 0.61
VPS72-204ENST00000471423 CILPO75339 1184 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 LETM1O95202 739 aaPredicted RBP18.88■□□□□ 0.61
VPS72-204ENST00000471423 MYL5Q02045 173 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 CUL2Q13617 745 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 MAN2A1Q16706 1144 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 SLC5A9Q2M3M2 681 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 SKOR2Q2VWA4 1001 aaPredicted RBP18.88■□□□□ 0.61
VPS72-204ENST00000471423 SDHAF4Q5VUM1 108 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 OTOP3Q7RTS5 596 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 HS6ST3Q8IZP7 471 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 FAM200AQ8TCP9 573 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 GPR152Q8TDT2 470 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 WHAMMQ8TF30 809 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 GIPC2Q8TF65 315 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 PSMG2Q969U7 264 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 NT5C1BQ96P26 610 aa18.88■□□□□ 0.61
VPS72-204ENST00000471423 INTS2Q9H0H0 1204 aaKnown RBP18.88■□□□□ 0.61
VPS72-204ENST00000471423 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms