RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SLC6A2P23975 617 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 KRT9P35527 623 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 SEC24CP53992 1094 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 NPEPPSP55786 919 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 DLX2Q07687 328 aaPredicted RBP7.67□□□□□ -1.18
SMC5-202ENST00000471372 ARHGEF7Q14155 803 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 KCNAB1Q14722 419 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 UBXN2BQ14CS0 331 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 SURF1Q15526 300 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 NPY5RQ15761 445 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 SLC5A9Q2M3M2 681 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 ZMAT1Q5H9K5 638 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.67□□□□□ -1.18
SMC5-202ENST00000471372 GPATCH4Q5T3I0 446 aaKnown RBP7.67□□□□□ -1.18
SMC5-202ENST00000471372 FAM160B1Q5W0V3 765 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 PPP1R32Q7Z5V6 425 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 KCTD20Q7Z5Y7 419 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 XYLT1Q86Y38 959 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 CCDC117Q8IWD4 279 aaPredicted RBP7.67□□□□□ -1.18
SMC5-202ENST00000471372 HTRA1Q92743 480 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 HDAC2Q92769 488 aaKnown RBP7.67□□□□□ -1.18
SMC5-202ENST00000471372 KCNC2Q96PR1 638 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 PPP1R9BQ96SB3 815 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 IMPG2Q9BZV3 1241 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 TMEM168Q9H0V1 697 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 EPB41L4BQ9H329 900 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 PRDM8Q9NQV8 689 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 ADAM29Q9UKF5 820 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 SLC13A4Q9UKG4 626 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 CAPN11Q9UMQ6 739 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 ITIH6Q6UXX5 1313 aa7.67□□□□□ -1.18
SMC5-202ENST00000471372 B4E171 279 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 PCDH17O14917 1159 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 ZNF500O60304 480 aaPredicted RBP7.66□□□□□ -1.18
SMC5-202ENST00000471372 VPS4BO75351 444 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 BAIAP3O94812 1187 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 INMTO95050 263 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 POMCP01189 267 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 TPH1P17752 444 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 TSPAN7P41732 249 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 PLA1AQ53H76 456 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 PRR23BQ6ZRT6 265 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 TMEFF1Q8IYR6 380 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 DDX23Q9BUQ8 820 aaKnown RBP7.66□□□□□ -1.18
SMC5-202ENST00000471372 EPS8L2Q9H6S3 715 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 DKK4Q9UBT3 224 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 ZDHHC9Q9Y397 364 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 DTNAQ9Y4J8 743 aa7.66□□□□□ -1.18
SMC5-202ENST00000471372 UBE2QL1A1L167 161 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 A6NCN8 305 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 DNPH1O43598 174 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 TBX18O95935 607 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 CHEK2O96017 543 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 CYP1A1P04798 512 aaPredicted RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 MST1P26927 711 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 TXKP42681 527 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 PTDSS1P48651 473 aaKnown RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 PAPOLAP51003 745 aaKnown RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 GP2P55259 537 aaKnown RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 WNT3P56703 355 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 BOP1Q14137 746 aaKnown RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 RNF151Q2KHN1 245 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 NBPF8Q3BBV2 869 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 SLC44A2Q8IWA5 706 aaPredicted RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 PDPRQ8NCN5 879 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 TBC1D15Q8TC07 691 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 CSGALNACT1Q8TDX6 532 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 THAP4Q8WY91 577 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 MESP1Q9BRJ9 268 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 RTKNQ9BST9 563 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 EPC1Q9H2F5 836 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 TAF1DQ9H5J8 278 aaPredicted RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 BARX1Q9HBU1 254 aaPredicted RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 XPNPEP3Q9NQH7 507 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 HESX1Q9UBX0 185 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 RABGAP1Q9Y3P9 1069 aa7.65□□□□□ -1.18
SMC5-202ENST00000471372 OAS3Q9Y6K5 1087 aaKnown RBP7.65□□□□□ -1.18
SMC5-202ENST00000471372 B5MCH6 92 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 DCLK1O15075 740 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 HOXA3O43365 443 aaPredicted RBP7.64□□□□□ -1.19
SMC5-202ENST00000471372 VIPR2P41587 438 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 NR1H2P55055 460 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 POLE2P56282 527 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 AP2B1P63010 937 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 TLE2Q04725 743 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 TCF15Q12870 199 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 TRPC3Q13507 836 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 EFR3AQ14156 821 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 DLGAP5Q15398 846 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 BMT2Q1RMZ1 405 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 FAXCQ5TGI0 409 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 MCTP2Q6DN12 878 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 GAS2L3Q86XJ1 694 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 KRT73Q86Y46 540 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 ZNF280BQ86YH2 543 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 RABGGTAQ92696 567 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 ZBTB10Q96DT7 871 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 COG8Q96MW5 612 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 KRTAP9-9Q9BYP9 154 aa7.64□□□□□ -1.19
SMC5-202ENST00000471372 KRTAP9-4Q9BYQ2 154 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms