RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 ZNF852Q6ZMS4 543 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 FANCMQ8IYD8 2048 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 DCP1BQ8IZD4 617 aaKnown RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 TTC8Q8TAM2 541 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 PLEKHO2Q8TD55 490 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 DEPDC1BQ8WUY9 529 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 LEO1Q8WVC0 666 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 IRF7Q92985 503 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 CCDC127Q96BQ5 260 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 HPDLQ96IR7 371 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 BCO2Q9BYV7 579 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 CFAP45Q9UL16 551 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 KIF26AQ9ULI4 1882 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 PIAS3Q9Y6X2 628 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 ZNF292O60281 2723 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 RIF1Q5UIP0 2472 aaKnown RBP16.48■□□□□ 0.23
COL1A1-203ENST00000471344 DCHS1Q96JQ0 3298 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 F5P12259 2224 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 MYBPHLA2RUH7 354 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 SLC38A8A6NNN8 435 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 GABRDO14764 452 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
COL1A1-203ENST00000471344 TADA3O75528 432 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 TNNC2P02585 160 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 LMO2P25791 158 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 CASP4P49662 377 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 FCHO2Q0JRZ9 810 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 BMT2Q1RMZ1 405 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 WDR44Q5JSH3 913 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 ATL3Q6DD88 541 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 LIMS2Q7Z4I7 341 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 WDR49Q8IV35 697 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 TOP6BLQ8N6T0 577 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 KIAA0895Q8NCT3 520 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 ZNF516Q92618 1163 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 CLDN23Q96B33 292 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 ELMO3Q96BJ8 720 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 PAGE5Q96GU1 130 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 ACBD6Q9BR61 282 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 SLC46A2Q9BY10 475 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 OSBPL6Q9BZF3 934 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 GPR88Q9GZN0 384 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 MAGED2Q9UNF1 606 aaPredicted RBP16.48■□□□□ 0.23
COL1A1-203ENST00000471344 NME7Q9Y5B8 376 aa16.48■□□□□ 0.23
COL1A1-203ENST00000471344 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
COL1A1-203ENST00000471344 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 NLRP12P59046 1061 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 MYL7Q01449 175 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 SMARCB1Q12824 385 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 STK4Q13043 487 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 PSMD6Q15008 389 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 TAF12Q16514 161 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 ARHGAP15Q53QZ3 475 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 TSSK4Q6SA08 328 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 CEP57L1Q8IYX8 460 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 XXYLT1Q8NBI6 393 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 RIN3Q8TB24 985 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 CGRRF1Q99675 332 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 TASP1Q9H6P5 420 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 CRTAC1Q9NQ79 661 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 CCL26Q9Y258 94 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 GVINP1Q7Z2Y8 2422 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 PTPRDP23468 1912 aa16.47■□□□□ 0.23
COL1A1-203ENST00000471344 PVALEFA0A1B0GWK0 134 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 FGF19O95750 216 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 F11P03951 625 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 TNNI1P19237 187 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 CCNE1P24864 410 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 CDC25CP30307 473 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 TNK2Q07912 1038 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 MYO1EQ12965 1108 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 MTAPQ13126 283 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-203ENST00000471344 KNOP1Q1ED39 458 aaKnown RBP16.46■□□□□ 0.23
COL1A1-203ENST00000471344 KMT5BQ4FZB7 885 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 TXNDC8Q6A555 127 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 TXNDC11Q6PKC3 985 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 YAF2Q8IY57 180 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 ADSSL1Q8N142 457 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 MAB21L3Q8N8X9 362 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 FAM3CQ92520 227 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 GCNAQ96QF7 691 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 SYT15Q9BQS2 421 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 MRPL45Q9BRJ2 306 aaKnown RBP16.46■□□□□ 0.23
COL1A1-203ENST00000471344 KIAA1586Q9HCI6 787 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 TRPV5Q9NQA5 729 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 GTSE1Q9NYZ3 720 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 HPSEQ9Y251 543 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 FAM186AA6NE01 2351 aa16.46■□□□□ 0.23
COL1A1-203ENST00000471344 CHADO15335 359 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 LAMTOR5O43504 91 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 PDGFRBP09619 1106 aa16.45■□□□□ 0.22
COL1A1-203ENST00000471344 RPS9P46781 194 aaKnown RBP16.45■□□□□ 0.22
COL1A1-203ENST00000471344 LHX1P48742 406 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms