RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 CDR2Q01850 454 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 PTPN14Q15678 1187 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 PSMD5Q16401 504 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 CTXN3Q4LDR2 81 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 ARHGAP17Q68EM7 881 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 PRSS55Q6UWB4 352 aaPredicted RBP12.35□□□□□ -0.43
FN1-217ENST00000471193 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 VPS52Q8N1B4 723 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 ZNF606Q8WXB4 792 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
FN1-217ENST00000471193 HEXIM2Q96MH2 286 aaKnown RBP12.35□□□□□ -0.43
FN1-217ENST00000471193 TMEM209Q96SK2 561 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 ZCWPW1Q9H0M4 648 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 NHEJ1Q9H9Q4 299 aaPredicted RBP12.35□□□□□ -0.43
FN1-217ENST00000471193 FAM49BQ9NUQ9 324 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 PUF60Q9UHX1 559 aaKnown RBP12.35□□□□□ -0.43
FN1-217ENST00000471193 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 KIAA1257Q9ULG3 409 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.35□□□□□ -0.43
FN1-217ENST00000471193 BACE2Q9Y5Z0 518 aa12.35□□□□□ -0.43
FN1-217ENST00000471193 MYBPHLA2RUH7 354 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 MED7O43513 233 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 MMEP08473 750 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 OR4Q2P0C623 313 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 CCDC130P13994 396 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 EIF4A3P38919 411 aaKnown RBP12.34□□□□□ -0.43
FN1-217ENST00000471193 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
FN1-217ENST00000471193 STILQ15468 1287 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 ASTE1Q2TB18 679 aaPredicted RBP12.34□□□□□ -0.43
FN1-217ENST00000471193 PPP1R26Q5T8A7 1209 aaPredicted RBP12.34□□□□□ -0.43
FN1-217ENST00000471193 SLC8B1Q6J4K2 584 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 KIAA1841Q6NSI8 718 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 RSPO2Q6UXX9 243 aaPredicted RBP12.34□□□□□ -0.43
FN1-217ENST00000471193 C12orf29Q8N999 325 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 MYCBPAPQ8TBZ2 947 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 SPPL3Q8TCT6 385 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 MYLPFQ96A32 169 aa12.34□□□□□ -0.43
FN1-217ENST00000471193 ALG13Q9NP73 1137 aaKnown RBP12.34□□□□□ -0.43
FN1-217ENST00000471193 PDE4DIPQ5VU43 2346 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 H3BNC9 293 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 DDX3XO00571 662 aaKnown RBP eCLIP12.33□□□□□ -0.44
FN1-217ENST00000471193 C2CD2LO14523 706 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 FSCN2O14926 492 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 ARHGAP6O43182 974 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 NRDCO43847 1150 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 LILRB3O75022 631 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 MICAL2O94851 1124 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 CFHP08603 1231 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 DNAJB1P25685 340 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 KIF11P52732 1056 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 CREMQ03060 361 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
FN1-217ENST00000471193 CNGA2Q16280 664 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 GOLGA7BQ2TAP0 167 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 LRIT3Q3SXY7 679 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 SLC39A12Q504Y0 691 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 RAD9BQ6WBX8 426 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 TRIM72Q6ZMU5 477 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 LRRTM3Q86VH5 581 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 VPS36Q86VN1 386 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 PALB2Q86YC2 1186 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 GLYCTKQ8IVS8 523 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 DCP1BQ8IZD4 617 aaKnown RBP12.33□□□□□ -0.44
FN1-217ENST00000471193 FUKQ8N0W3 1084 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 SLC30A5Q8TAD4 765 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 SLC2A14Q8TDB8 520 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 POF1BQ8WVV4 589 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 AUTS2Q8WXX7 1259 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 TIFAQ96CG3 184 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 CYFIP2Q96F07 1278 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 PCED1BQ96HM7 432 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 HNRNPABQ99729 332 aaKnown RBP12.33□□□□□ -0.44
FN1-217ENST00000471193 TCF25Q9BQ70 676 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 DEF6Q9H4E7 631 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 SLC28A3Q9HAS3 691 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 TLR9Q9NR96 1032 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.33□□□□□ -0.44
FN1-217ENST00000471193 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
FN1-217ENST00000471193 TMLHEQ9NVH6 421 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 FNIP2Q9P278 1114 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 TSPAN16Q9UKR8 245 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 NENFQ9UMX5 172 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 SSX2IPQ9Y2D8 614 aa12.33□□□□□ -0.44
FN1-217ENST00000471193 CDY1Q9Y6F8 540 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms