RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 OVOS1Q6IE37 1185 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 TXNDC11Q6PKC3 985 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 DSTYKQ6XUX3 929 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 Q6ZS52 159 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 HAUS6Q7Z4H7 955 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 ITIH5Q86UX2 942 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 CCDC65Q8IXS2 484 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 TMEM130Q8N3G9 435 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 DNAJC19Q96DA6 116 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 LRRC3BQ96PB8 259 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 RBM12Q9NTZ6 932 aaKnown RBP9.79□□□□□ -0.84
SF3A1-206ENST00000471037 EXOC1Q9NV70 894 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 ODF2LQ9ULJ1 636 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 CACNA1BQ00975 2339 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 ACACBO00763 2458 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 TSC2P49815 1807 aa9.79□□□□□ -0.84
SF3A1-206ENST00000471037 SPTBN2O15020 2390 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 TPRP12270 2363 aaKnown RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 FRMD3A2A2Y4 597 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 LACTBL1A8MY62 500 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 DPYSL4O14531 572 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 PPEF2O14830 753 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 HNRNPDLO14979 420 aaKnown RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 OGTO15294 1046 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 KLRC4O43908 158 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 TBCAO75347 108 aaKnown RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 RHOBTB3O94955 611 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 CYP11A1P05108 521 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ODC1P11926 461 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 IDEP14735 1019 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 GAP43P17677 238 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 GABRR2P28476 465 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 CASP1P29466 404 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 MATR3P43243 847 aaKnown RBP eCLIP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 LIG4P49917 911 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 GUCY2FP51841 1108 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 NLRP12P59046 1061 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 LILRA4P59901 499 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 TYRO3Q06418 890 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 MORC3Q14149 939 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 STX1AQ16623 288 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ARHGAP15Q53QZ3 475 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 PPM1JQ5JR12 505 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ARMCX5Q6P1M9 558 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 LRSAM1Q6UWE0 723 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 DYMQ7RTS9 669 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 DNAJB7Q7Z6W7 309 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 CD302Q8IX05 232 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 TTC9BQ8N6N2 239 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ATAD1Q8NBU5 361 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ERCC4Q92889 916 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 BICD1Q96G01 975 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 SENP8Q96LD8 212 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 REEP2Q9BRK0 252 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 FUCA2Q9BTY2 467 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ATXN3LQ9H3M9 355 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 PANK4Q9NVE7 773 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ANO10Q9NW15 660 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 GTSE1Q9NYZ3 720 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 ZMYM5Q9UJ78 669 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 MAN1B1Q9UKM7 699 aa9.78□□□□□ -0.84
SF3A1-206ENST00000471037 KIF26AQ9ULI4 1882 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-206ENST00000471037 CCDC163A0A0D9SF12 145 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 BIN1O00499 593 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 PIRO00625 290 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 KRT37O76014 449 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 FAM13AO94988 1023 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 PRAMEF12O95522 483 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 CAVIN2O95810 425 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 ATF6P18850 670 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 CDC25CP30307 473 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 TUFMP49411 452 aaKnown RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 ZNF131P52739 623 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 PSMD2Q13200 908 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 SRSF5Q13243 272 aaKnown RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 PON2Q15165 354 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 GPR158Q5T848 1215 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 ZNF658Q5TYW1 1059 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 C9orf57Q5W0N0 161 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 WDR5BQ86VZ2 330 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 FAM160A2Q8N612 972 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 MLKLQ8NB16 471 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 OR10T2Q8NGX3 314 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 BPIFB1Q8TDL5 484 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 DDX1Q92499 740 aaKnown RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 ZFYVE19Q96K21 471 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 TMEM209Q96SK2 561 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 TASP1Q9H6P5 420 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 RPF1Q9H9Y2 349 aaKnown RBP9.77□□□□□ -0.85
SF3A1-206ENST00000471037 IL21Q9HBE4 155 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 PARVGQ9HBI0 331 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 C2orf42Q9NWW7 574 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 SEL1LQ9UBV2 794 aa9.77□□□□□ -0.85
SF3A1-206ENST00000471037 DACH1Q9UI36 760 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms