RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 IL12RB1P42701 662 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 SEC24CP53992 1094 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 GTF2H3Q13889 308 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 PDPRQ8NCN5 879 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 SLC9A6Q92581 669 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 CDK5RAP3Q96JB5 506 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 Q96MF0 132 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 AIFM3Q96NN9 605 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 CRAMP1Q96RY5 1269 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 AGAP2Q99490 1192 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 SMOQ99835 787 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 RTFDC1Q9BY42 306 aaPredicted RBP5.19□□□□□ -1.58
COL9A1-206ENST00000470652 SIK2Q9H0K1 926 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 MRPL46Q9H2W6 279 aaKnown RBP5.19□□□□□ -1.58
COL9A1-206ENST00000470652 CASS4Q9NQ75 786 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 PNPOQ9NVS9 261 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 ZIM2Q9NZV7 527 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 DMTF1Q9Y222 760 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 CNTLNQ9NXG0 1405 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 A2ML1A8K2U0 1454 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 RPRD2Q5VT52 1461 aaKnown RBP5.19□□□□□ -1.58
COL9A1-206ENST00000470652 LMTK3Q96Q04 1460 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 NRXN3Q9Y4C0 1643 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 STRCQ7RTU9 1775 aa5.19□□□□□ -1.58
COL9A1-206ENST00000470652 CCDC144AA2RUR9 1427 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 TRGV11A0A075B6L2 103 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 H3BUI4 141 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 AP1G1O43747 822 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 ZFPL1O95159 310 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 RARBP10826 455 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 HSPA6P17066 643 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 RPS7P62081 194 aaKnown RBP5.18□□□□□ -1.58
COL9A1-206ENST00000470652 FPGSQ05932 587 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 MPP3Q13368 585 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 DYRK1AQ13627 763 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 KIF22Q14807 665 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 GEN1Q17RS7 908 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 NBPF8Q3BBV2 869 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 PLEKHG6Q3KR16 790 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 GRAMD1CQ8IYS0 662 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 ANKRD13AQ8IZ07 590 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 LNX2Q8N448 690 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 SH2D3CQ8N5H7 860 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 TNPO1Q92973 898 aaKnown RBP5.18□□□□□ -1.58
COL9A1-206ENST00000470652 C1orf43Q9BWL3 253 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 SLC12A5Q9H2X9 1139 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 GPR35Q9HC97 309 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 NMRK2Q9NPI5 230 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 SLAMF7Q9NQ25 335 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 CTTNBP2NLQ9P2B4 639 aa5.18□□□□□ -1.58
COL9A1-206ENST00000470652 SETD1AO15047 1707 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 NEURL4Q96JN8 1562 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 PRSS29PA6NIE9 313 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 ZNF785A8K8V0 405 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 E7ENX8 843 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 SUN1O94901 812 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 S100BP04271 92 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 GNAI2P04899 355 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 U2AF1L5P0DN76 240 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 MPLP40238 635 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 ANXA11P50995 505 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 PSMC1P62191 440 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 U2AF1Q01081 240 aaKnown RBP eCLIP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 TAP2Q03519 686 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 HABP2Q14520 560 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 HLXQ14774 488 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 Q6ZNX1 250 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 TPH2Q8IWU9 490 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 SLC44A3Q8N4M1 653 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 NSUN7Q8NE18 718 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 GPR150Q8NGU9 434 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 DIS3LQ8TF46 1054 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 DDX17Q92841 729 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 MTFMTQ96DP5 389 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 SLC35A4Q96G79 324 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 TRIB1Q96RU8 372 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 CNPPD1Q9BV87 410 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 INTS13Q9NVM9 706 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 VSX1Q9NZR4 365 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 THRAP3Q9Y2W1 955 aaKnown RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 TNFRSF18Q9Y5U5 241 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 NR2E3Q9Y5X4 410 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 ADGRF5Q8IZF2 1346 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 ASXL1Q8IXJ9 1541 aa5.17□□□□□ -1.58
COL9A1-206ENST00000470652 POLR1AO95602 1720 aaPredicted RBP5.17□□□□□ -1.58
COL9A1-206ENST00000470652 STRCP1A6NGW2 1772 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 SETD1BQ9UPS6 1966 aaKnown RBP5.16□□□□□ -1.58
COL9A1-206ENST00000470652 E9PLN8 166 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 POLRMTO00411 1230 aaKnown RBP5.16□□□□□ -1.58
COL9A1-206ENST00000470652 TOR1BO14657 336 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 MATN4O95460 622 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 LMNAP02545 664 aaKnown RBP5.16□□□□□ -1.58
COL9A1-206ENST00000470652 ALDH2P05091 517 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 NKX6-1P78426 367 aaPredicted RBP5.16□□□□□ -1.58
COL9A1-206ENST00000470652 COL10A1Q03692 680 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 FOXI1Q12951 378 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 ZNF267Q14586 743 aaPredicted RBP5.16□□□□□ -1.58
COL9A1-206ENST00000470652 PLS1Q14651 629 aa5.16□□□□□ -1.58
COL9A1-206ENST00000470652 ERCC6LQ2NKX8 1250 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms