RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 PPEF2O14830 753 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 PLS3P13797 630 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 PAX3P23760 479 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 GJA4P35212 333 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 TNFSF9P41273 254 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 MAPK8P45983 427 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 SEC13P55735 322 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 LILRA4P59901 499 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 SMARCB1Q12824 385 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 NR1H3Q13133 447 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 MAPK7Q13164 816 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 MTF1Q14872 753 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 ME3Q16798 604 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 TXNDC8Q6A555 127 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 RINT1Q6NUQ1 792 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 ATP2A3Q93084 1043 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 SPACA7Q96KW9 195 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 ZCWPW1Q9H0M4 648 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 ECT2Q9H8V3 914 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 DUS2Q9NX74 493 aaKnown RBP13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 WASF3Q9UPY6 502 aa13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 ASCC3Q8N3C0 2202 aaKnown RBP13.52□□□□□ -0.25
HIGD1A-205ENST00000470543 MAP3K13O43283 966 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 SEC24BO95487 1268 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 CKMP06732 381 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 MAPTP10636 758 aaKnown RBP13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 HAPLN1P10915 354 aaPredicted RBP13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 ATXN3P54252 364 aaPredicted RBP13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 NLRP12P59046 1061 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 TMEM132DQ14C87 1099 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 TRIM61Q5EBN2 209 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 NAIF1Q69YI7 327 aaPredicted RBP13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 DCP1BQ8IZD4 617 aaKnown RBP13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 TMEM161BQ8NDZ6 487 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 TSPAN18Q96SJ8 248 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 PYM1Q9BRP8 204 aaKnown RBP13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 FBRSL1Q9HCM7 1045 aaKnown RBP13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 SPEGQ15772 3267 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 SCN1AP35498 2009 aa13.51□□□□□ -0.25
HIGD1A-205ENST00000470543 ZZEF1O43149 2961 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 ANKRD11Q6UB99 2663 aaPredicted RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 CDX4O14627 284 aaPredicted RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 ALDH1A2O94788 518 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 CSH1P0DML2 217 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 CSH2P0DML3 217 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 BCKDHBP21953 392 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 GUCY2CP25092 1073 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 IRX4P78413 519 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 ZNF268Q14587 947 aaPredicted RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 C2orf27AQ580R0 203 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 SPATA1Q5VX52 437 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 JADE1Q6IE81 842 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 C1orf186Q6ZWK4 172 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 ARMCX6Q7L4S7 300 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 LPCAT2Q7L5N7 544 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 HDDC3Q8N4P3 179 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 OSCP1Q8WVF1 389 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 CNOT6LQ96LI5 555 aaKnown RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 MSTO1Q9BUK6 570 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 FOXP1Q9H334 677 aaPredicted RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 BCCIPQ9P287 314 aaKnown RBP eCLIP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 UXTQ9UBK9 157 aaPredicted RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 KLK13Q9UKR3 277 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 TBX20Q9UMR3 447 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 PCDHB5Q9Y5E4 795 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 WNT6Q9Y6F9 365 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 ASPMQ8IZT6 3477 aa13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 HELZP42694 1942 aaKnown RBP13.5□□□□□ -0.25
HIGD1A-205ENST00000470543 TRAV19A0A0A6YYK7 116 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 SPAARA0A1B0GVQ0 90 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 CYB561D2O14569 222 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 OGTO15294 1046 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 PRPF40AO75400 957 aaKnown RBP13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 CYP11A1P05108 521 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 CFIP05156 583 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 NFICP08651 508 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 TRAPPC10P48553 1259 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 TAF6P49848 677 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 TSPY1Q01534 308 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 PDIA5Q14554 519 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 NBR1Q14596 966 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 ENOX2Q16206 610 aaKnown RBP13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 C9orf57Q5W0N0 161 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 MON1AQ86VX9 555 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 CD302Q8IX05 232 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 STKLD1Q8NE28 680 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 MDGA1Q8NFP4 955 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 CDK5RAP3Q96JB5 506 aa13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 LARSQ9P2J5 1176 aaKnown RBP13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 EVLQ9UI08 416 aaPredicted RBP13.49□□□□□ -0.25
HIGD1A-205ENST00000470543 MSRB2Q9Y3D2 182 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms