RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 GPD2P43304 727 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 PDCLQ13371 301 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 STILQ15468 1287 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 LRRC8DQ7L1W4 858 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 ECHDC2Q86YB7 292 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 FAM126BQ8IXS8 530 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 C3orf20Q8ND61 904 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 C18orf8Q96DM3 657 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 INPP5FQ9Y2H2 1132 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 GOLGA8SH3BPF8 625 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 PODXLO00592 558 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 ERBB2P04626 1255 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 LMO2P25791 158 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 CTNNA2P26232 953 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 SLC1A1P43005 524 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 PEX5P50542 639 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 CLCN6P51797 869 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 DAB2IPQ5VWQ8 1189 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 CCDC70Q6NSX1 233 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 DCUN1D2Q6PH85 259 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 LPIN3Q9BQK8 851 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 AP1M1Q9BXS5 423 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 ST7Q9NRC1 585 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 PCDHA3Q9Y5H8 950 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 CYB561D2O14569 222 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 FGGP02679 453 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 PSMC1P62191 440 aaKnown RBP19.18■□□□□ 0.66
SMC4-211ENST00000469858 MRPS25P82663 173 aaKnown RBP19.18■□□□□ 0.66
SMC4-211ENST00000469858 AADACL2Q6P093 401 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 LIMS2Q7Z4I7 341 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 TOP6BLQ8N6T0 577 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.18■□□□□ 0.66
SMC4-211ENST00000469858 UBE2Q2Q8WVN8 375 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 LRRC1Q9BTT6 524 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 RGS18Q9NS28 235 aa19.18■□□□□ 0.66
SMC4-211ENST00000469858 TMEM191CA6NGB0 347 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 SELPP16109 830 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 RTN4RL1Q86UN2 441 aaPredicted RBP19.17■□□□□ 0.66
SMC4-211ENST00000469858 PAAF1Q9BRP4 392 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 UBN1Q9NPG3 1134 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 IP6K2Q9UHH9 426 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 TMEM59LQ9UK28 342 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 OGDHLQ9ULD0 1010 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 USTQ9Y2C2 406 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 KRIT1O00522 736 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 PFKMP08237 780 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 RWDD2BP57060 319 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 TAP1Q03518 808 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 LONRF2Q1L5Z9 754 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 PPP1R15BQ5SWA1 713 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 SEL1L2Q5TEA6 688 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 WSCD1Q658N2 575 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 C8orf74Q6P047 294 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 ZNF598Q86UK7 904 aaKnown RBP19.17■□□□□ 0.66
SMC4-211ENST00000469858 OSTM1Q86WC4 334 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 TTC30AQ86WT1 665 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 XYLT1Q86Y38 959 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 C3orf58Q8NDZ4 430 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 IPO4Q8TEX9 1081 aaKnown RBP19.17■□□□□ 0.66
SMC4-211ENST00000469858 LINC01599Q8WXQ3 324 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 KRT12Q99456 494 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 SEZ6LQ9BYH1 1024 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 WBP1LQ9NX94 342 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 HESX1Q9UBX0 185 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 RAB21Q9UL25 225 aa19.17■□□□□ 0.66
SMC4-211ENST00000469858 TTC7AQ9ULT0 858 aaPredicted RBP19.17■□□□□ 0.66
SMC4-211ENST00000469858 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.17■□□□□ 0.66
SMC4-211ENST00000469858 CCDC130P13994 396 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 WARSP23381 471 aaKnown RBP19.16■□□□□ 0.66
SMC4-211ENST00000469858 VSNL1P62760 191 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 GRIK3Q13003 919 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 BFSP2Q13515 415 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 SLC24A5Q71RS6 500 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 KLHL7Q8IXQ5 586 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 CRYBG2Q8N1P7 616 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 SENP8Q96LD8 212 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 WDR35Q9P2L0 1181 aa19.16■□□□□ 0.66
SMC4-211ENST00000469858 TARSL2A2RTX5 802 aaKnown RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 C9IYK1 514 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 PIK3R2O00459 728 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 PQBP1O60828 265 aaKnown RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 PYGMP11217 842 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 KRT3P12035 628 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 ADORA2BP29275 332 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 RPL9P32969 192 aaKnown RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 SSR1P43307 286 aaKnown RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 GABRB2P47870 512 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 ZNF252P-AS1Q0IIN9 211 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 UPP1Q16831 310 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 ARHGAP17Q68EM7 881 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 ADAT2Q7Z6V5 191 aaKnown RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 HDAC7Q8WUI4 952 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 DNAI2Q9GZS0 605 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 METTL5Q9NRN9 209 aaKnown RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 TULP2O00295 520 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 MAN1A1P33908 653 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 RGS7P49802 495 aa19.15■□□□□ 0.66
SMC4-211ENST00000469858 ATN1P54259 1190 aaPredicted RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 GSCP56915 257 aaPredicted RBP19.15■□□□□ 0.66
SMC4-211ENST00000469858 SLC7A5Q01650 507 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms