RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 OSTM1Q86WC4 334 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 SPATA2LQ8IUW3 424 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 TMEM176AQ96HP8 235 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 EDEM3Q9BZQ6 932 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 ELOVL4Q9GZR5 314 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 SDCBP2Q9H190 292 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 CLDND1Q9NY35 253 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 GTF3C4Q9UKN8 822 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 MYO7AQ13402 2215 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 VWA8A3KMH1 1905 aa13.45□□□□□ -0.26
SPTLC1-204ENST00000469778 MYBPHLA2RUH7 354 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 LRRN2O75325 713 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 CSPG5O95196 566 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 EPCAMP16422 314 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 LRMPQ12912 555 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 STILQ15468 1287 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 CCDC85BQ15834 202 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 PPM1LQ5SGD2 360 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 SCARA5Q6ZMJ2 495 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 LRRTM3Q86VH5 581 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 ELMOD1Q8N336 334 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 UBR7Q8N806 425 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 LEMD2Q8NC56 503 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 NEK11Q8NG66 645 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 HEXIM2Q96MH2 286 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 NECTIN4Q96NY8 510 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 STK33Q9BYT3 514 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 ADAM7Q9H2U9 754 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 UBE2ZQ9H832 354 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 CYP4F11Q9HBI6 524 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 MAN1C1Q9NR34 630 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 CEP72Q9P209 647 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 DNAJC12Q9UKB3 198 aa13.44□□□□□ -0.26
SPTLC1-204ENST00000469778 MTMR11A4FU01 709 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 C8AP07357 584 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 HAPLN1P10915 354 aaPredicted RBP13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 VDRP11473 427 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 UCHL3P15374 230 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 CD58P19256 250 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 ACO1P21399 889 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 ACAT1P24752 427 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 LTBRP36941 435 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 RAD23BP54727 409 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 SLC8A3P57103 927 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 DUSP4Q13115 394 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 SYCP1Q15431 976 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 MEA1Q16626 185 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 LEXMQ3ZCV2 418 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 FIGNQ5HY92 759 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 ATAT1Q5SQI0 421 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 RRAGAQ7L523 313 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 ITIH5Q86UX2 942 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 VN1R2Q8NFZ6 395 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 WHAMMQ8TF30 809 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 SHC3Q92529 594 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 PCED1BQ96HM7 432 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 MSLNLQ96KJ4 702 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 PCMTD1Q96MG8 357 aaPredicted RBP13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 HNRNPABQ99729 332 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 NAA15Q9BXJ9 866 aaKnown RBP13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 PRKD2Q9BZL6 878 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 UBXN6Q9BZV1 441 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 CRTAC1Q9NQ79 661 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 CLEC1BQ9P126 229 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 MYO6Q9UM54 1294 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 PCDHB4Q9Y5E5 795 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 SZT2Q5T011 3432 aa13.43□□□□□ -0.26
SPTLC1-204ENST00000469778 CCDC195A0A1B0GUA6 201 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 TRIM66O15016 1216 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 MED7O43513 233 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ATP2C2O75185 946 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 FGF19O95750 216 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 GLP2RO95838 553 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 LRG1P02750 347 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 OR4Q2P0C623 313 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 CCDC172P0C7W6 258 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 MTHFRP42898 656 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 RAP1GAPP47736 663 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 EPHB3P54753 998 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 PTK2Q05397 1052 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 VEPH1Q14D04 833 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 MDH1BQ5I0G3 518 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ARHGAP17Q68EM7 881 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 IQCEQ6IPM2 695 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 DPY19L2P1Q6NXN4 242 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 LLGL2Q6P1M3 1020 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 SARM1Q6SZW1 724 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 TMEM270Q6UE05 265 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 GPR149Q86SP6 731 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ACOT1Q86TX2 421 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 ARHGEF19Q8IW93 802 aa13.42□□□□□ -0.26
SPTLC1-204ENST00000469778 FAM71AQ8IYT1 594 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms