RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 STK17AQ9UEE5 414 aa20.28■□□□□ 0.84
TRAK1-207ENST00000469506 AGAP1Q9UPQ3 857 aa20.28■□□□□ 0.84
TRAK1-207ENST00000469506 SRPRBQ9Y5M8 271 aaKnown RBP20.28■□□□□ 0.84
TRAK1-207ENST00000469506 GOLGA8IPA6NC78 632 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 GOLGA8JA6NMD2 632 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 TADA3O75528 432 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 IL18RAPO95256 599 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 ITGB3P05106 788 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 RETP07949 1114 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 ACAT1P24752 427 aaKnown RBP20.27■□□□□ 0.84
TRAK1-207ENST00000469506 LMNB2Q03252 620 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 ITPRIPL2Q3MIP1 535 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 SV2CQ496J9 727 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 FSTL4Q6MZW2 842 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 C1orf228Q6PIY5 440 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 LONP2Q86WA8 852 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 CBWD1Q9BRT8 395 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 FBRSL1Q9HCM7 1045 aaKnown RBP20.27■□□□□ 0.84
TRAK1-207ENST00000469506 SIX4Q9UIU6 781 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 PCDHB5Q9Y5E4 795 aa20.27■□□□□ 0.84
TRAK1-207ENST00000469506 HELZP42694 1942 aaKnown RBP20.26■□□□□ 0.83
TRAK1-207ENST00000469506 PRR5-ARHGAP8B1AHC4 643 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 ARSAP15289 507 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 CYP2F1P24903 491 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 ARHGAP8P85298 464 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 TFAMQ00059 246 aaKnown RBP20.26■□□□□ 0.83
TRAK1-207ENST00000469506 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
TRAK1-207ENST00000469506 POSTNQ15063 836 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 DDR2Q16832 855 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 RRAGBQ5VZM2 374 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 BRSK2Q8IWQ3 736 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 DCP1BQ8IZD4 617 aaKnown RBP20.26■□□□□ 0.83
TRAK1-207ENST00000469506 ACCSQ96QU6 501 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 EBF3Q9H4W6 596 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 CDV3Q9UKY7 258 aaKnown RBP20.26■□□□□ 0.83
TRAK1-207ENST00000469506 EPG5Q9HCE0 2579 aa20.26■□□□□ 0.83
TRAK1-207ENST00000469506 ACACBO00763 2458 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 FRMD3A2A2Y4 597 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
TRAK1-207ENST00000469506 GDF9O60383 454 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 PRPF40AO75400 957 aaKnown RBP20.25■□□□□ 0.83
TRAK1-207ENST00000469506 PXNP49023 591 aaPredicted RBP20.25■□□□□ 0.83
TRAK1-207ENST00000469506 PLCB2Q00722 1185 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 SMARCB1Q12824 385 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 TAF12Q16514 161 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 SV2BQ7L1I2 683 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 NT5DC4Q86YG4 428 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 GLIS3Q8NEA6 775 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 SLC22A12Q96S37 553 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 PCIF1Q9H4Z3 704 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 PDE11AQ9HCR9 933 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 SEMA4GQ9NTN9 838 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 DDX43Q9NXZ2 648 aaKnown RBP20.25■□□□□ 0.83
TRAK1-207ENST00000469506 SEL1LQ9UBV2 794 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 RAB23Q9ULC3 237 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 MAGED2Q9UNF1 606 aaPredicted RBP20.25■□□□□ 0.83
TRAK1-207ENST00000469506 CNOT1A5YKK6 2376 aaKnown RBP20.25■□□□□ 0.83
TRAK1-207ENST00000469506 PTPRJQ12913 1337 aa20.25■□□□□ 0.83
TRAK1-207ENST00000469506 LAMA1P25391 3075 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 CACNA1BQ00975 2339 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 KMT2BQ9UMN6 2715 aaPredicted RBP20.24■□□□□ 0.83
TRAK1-207ENST00000469506 PRPF6O94906 941 aaKnown RBP20.24■□□□□ 0.83
TRAK1-207ENST00000469506 GCNT3O95395 438 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 GAP43P17677 238 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 HOXA6P31267 233 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 RUNX3Q13761 415 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 TMEM196Q5HYL7 178 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 LMBRD2Q68DH5 695 aaPredicted RBP20.24■□□□□ 0.83
TRAK1-207ENST00000469506 WDR5BQ86VZ2 330 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 FAM160A2Q8N612 972 aaPredicted RBP20.24■□□□□ 0.83
TRAK1-207ENST00000469506 ZNF560Q96MR9 790 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 GCNAQ96QF7 691 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 CYP2S1Q96SQ9 504 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 RTKNQ9BST9 563 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 OLFML3Q9NRN5 406 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 RBAKQ9NYW8 714 aaPredicted RBP20.24■□□□□ 0.83
TRAK1-207ENST00000469506 CCDC39Q9UFE4 941 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 GTF3C4Q9UKN8 822 aa20.24■□□□□ 0.83
TRAK1-207ENST00000469506 MYOFQ9NZM1 2061 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 SYT1P21579 422 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 BFSP1Q12934 665 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 INTS6LQ5JSJ4 861 aaKnown RBP20.23■□□□□ 0.83
TRAK1-207ENST00000469506 MON1AQ86VX9 555 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 SYNPOQ8N3V7 929 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 CSGALNACT2Q8N6G5 542 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 LEO1Q8WVC0 666 aaPredicted RBP20.23■□□□□ 0.83
TRAK1-207ENST00000469506 EZH1Q92800 747 aaPredicted RBP20.23■□□□□ 0.83
TRAK1-207ENST00000469506 HPS3Q969F9 1004 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 CNTNAP3BQ96NU0 1288 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 USP28Q96RU2 1077 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 ACBD6Q9BR61 282 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 CNTNAP3Q9BZ76 1288 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 TDP1Q9NUW8 608 aa20.23■□□□□ 0.83
TRAK1-207ENST00000469506 THG1LQ9NWX6 298 aaKnown RBP20.23■□□□□ 0.83
TRAK1-207ENST00000469506 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.22■□□□□ 0.83
TRAK1-207ENST00000469506 TRDMT1O14717 391 aaKnown RBP20.22■□□□□ 0.83
TRAK1-207ENST00000469506 GABRDO14764 452 aa20.22■□□□□ 0.83
TRAK1-207ENST00000469506 ATP2C2O75185 946 aa20.22■□□□□ 0.83
TRAK1-207ENST00000469506 NOL4O94818 638 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms