RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 RAD9AQ99638 391 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 LBHD1Q9BQE6 289 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 OXCT2Q9BYC2 517 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ZNF518BQ9C0D4 1074 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 CHST7Q9NS84 486 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 HMGXB4Q9UGU5 601 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 NAGPAQ9UK23 515 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 INTUQ9ULD6 942 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 ZMYND8Q9ULU4 1186 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-204ENST00000469232 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 INSL6Q9Y581 213 aa8.69□□□□□ -1.02
NPHP3-204ENST00000469232 VWA8A3KMH1 1905 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 CCDC85CA6NKD9 419 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 BTNL10A8MVZ5 291 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 TRAPPC3O43617 180 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 RNF40O75150 1001 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 LSM8O95777 96 aaKnown RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 KRT5P13647 590 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 SYN1P17600 705 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 LAG3P18627 525 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 BMP8BP34820 402 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 GNL1P36915 607 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 MAGEA10P43363 369 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 BRCC3P46736 316 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 PDE6CP51160 858 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 RNASELQ05823 741 aaKnown RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 KIAA0319Q5VV43 1072 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 PPP1R2P3Q6NXS1 205 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 KCNT2Q6UVM3 1135 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 LCLAT1Q6UWP7 414 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 SCARA5Q6ZMJ2 495 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 TOGARAM2Q6ZUX3 1019 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 ZSCAN30Q86W11 494 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 TMEM173Q86WV6 379 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 PALB2Q86YC2 1186 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 REXO1L1PQ8IX06 675 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 FAM193BQ96PV7 902 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 HNRNPABQ99729 332 aaKnown RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 ACBD6Q9BR61 282 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 VN1R3Q9BXE9 311 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 GPR62Q9BZJ7 368 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 MTIF3Q9H2K0 278 aaKnown RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 ACP6Q9NPH0 428 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 STK39Q9UEW8 545 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 ADAMTS1Q9UHI8 967 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 CDH9Q9ULB4 789 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 MRPL42Q9Y6G3 142 aaKnown RBP8.68□□□□□ -1.02
NPHP3-204ENST00000469232 SLC4A7Q9Y6M7 1214 aa8.68□□□□□ -1.02
NPHP3-204ENST00000469232 KIAA1671Q9BY89 1806 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 UPP2O95045 317 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 MMEP08473 750 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 CD58P19256 250 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 LMO2P25791 158 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 PCSK1P29120 753 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 GNA15P30679 374 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 OR1G1P47890 313 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 GSCP56915 257 aaPredicted RBP8.67□□□□□ -1.02
NPHP3-204ENST00000469232 NOMO3P69849 1222 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 KRT83P78385 493 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 PLCB3Q01970 1234 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 CENPCQ03188 943 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 ARID5AQ03989 594 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 PTP4A2Q12974 167 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 CLEC16AQ2KHT3 1053 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 FUT10Q6P4F1 479 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 ALKBH5Q6P6C2 394 aaKnown RBP8.67□□□□□ -1.02
NPHP3-204ENST00000469232 PAQR9Q6ZVX9 377 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 VPS36Q86VN1 386 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 GLYCTKQ8IVS8 523 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 WDTC1Q8N5D0 677 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 COLGALT1Q8NBJ5 622 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 STK32AQ8WU08 396 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 DPF3Q92784 378 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 TRIM44Q96DX7 344 aaPredicted RBP8.67□□□□□ -1.02
NPHP3-204ENST00000469232 VCPIP1Q96JH7 1222 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 TNIP3Q96KP6 325 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 ZNF558Q96NG5 402 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 MMS19Q96T76 1030 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 PRO3102Q9H379 93 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 CYLDQ9NQC7 956 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 SPTLC3Q9NUV7 552 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.67□□□□□ -1.02
NPHP3-204ENST00000469232 PPP2R2CQ9Y2T4 447 aa8.67□□□□□ -1.02
NPHP3-204ENST00000469232 SF3B1O75533 1304 aaKnown RBP eCLIP8.67□□□□□ -1.02
NPHP3-204ENST00000469232 C5orf67F2Z3F1 127 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 GPR37O15354 613 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 MED7O43513 233 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 AKR1B10O60218 316 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 LILRB3O75022 631 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 RTN2O75298 545 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 TADA2AO75478 443 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 SETSIPP0DME0 302 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 ATP2A2P16615 1042 aaKnown RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 PTPN1P18031 435 aaKnown RBP8.66□□□□□ -1.02
NPHP3-204ENST00000469232 TNFAIP3P21580 790 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 PPM1AP35813 382 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 ARHGAP25P42331 645 aa8.66□□□□□ -1.02
NPHP3-204ENST00000469232 ALDH7A1P49419 539 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms