RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 TRIM68Q6AZZ1 485 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 DYMQ7RTS9 669 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 SFR1Q86XK3 245 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 NT5DC4Q86YG4 428 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 RIN3Q8TB24 985 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 EPSTI1Q96J88 318 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 PCDHB5Q9Y5E4 795 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
COL5A1-207ENST00000469093 ANK1P16157 1881 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 ATG13O75143 517 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
COL5A1-207ENST00000469093 IL18RAPO95256 599 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 CSH1P0DML2 217 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 CSH2P0DML3 217 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 ARSAP15289 507 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 DDX6P26196 483 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL5A1-207ENST00000469093 PNPLA4P41247 253 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 GALK1P51570 392 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 BFSP1Q12934 665 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-207ENST00000469093 DDR2Q16832 855 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 SV2CQ496J9 727 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 SDHAF4Q5VUM1 108 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 GAB3Q8WWW8 586 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 LOXL4Q96JB6 756 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 FAM213AQ9BRX8 229 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 POLR3BQ9NW08 1133 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-207ENST00000469093 MAGED2Q9UNF1 606 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-207ENST00000469093 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
COL5A1-207ENST00000469093 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 TM4SF5O14894 197 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 RPP40O75818 363 aaKnown RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 EGFP01133 1207 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 ZNF806P0C7X5 589 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 CYP2F1P24903 491 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 POLR2BP30876 1174 aaKnown RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 TFAMQ00059 246 aaKnown RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 TSPY1Q01534 308 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 SF3A2Q15428 464 aaKnown RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 CCDC6Q16204 474 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 CC2D1AQ6P1N0 951 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 KBTBD6Q86V97 674 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 C1orf127Q8N9H9 656 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 CXorf38Q8TB03 319 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 HVCN1Q96D96 273 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 DNAJC19Q96DA6 116 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 MYRFLQ96LU7 910 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 PKMYT1Q99640 499 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 MRPL44Q9H9J2 332 aaKnown RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 RXFP3Q9NSD7 469 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 SLC8A2Q9UPR5 921 aa13.18□□□□□ -0.3
COL5A1-207ENST00000469093 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-207ENST00000469093 MYMKA6NI61 221 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 RNF40O75150 1001 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 DRD1P21728 446 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 ACAT1P24752 427 aaKnown RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 AMPD2Q01433 879 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 ZNF268Q14587 947 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 PDGFRLQ15198 375 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 NAIF1Q69YI7 327 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 CAMKK1Q8N5S9 505 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 CACTINQ8WUQ7 758 aaKnown RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 LEO1Q8WVC0 666 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 ZC3H10Q96K80 434 aaKnown RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 ZNF560Q96MR9 790 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 P2RY13Q9BPV8 354 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 KIF9Q9HAQ2 790 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 ABCB6Q9NP58 842 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 DDX43Q9NXZ2 648 aaKnown RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 SEL1LQ9UBV2 794 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 GTF3C4Q9UKN8 822 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 L1RE1Q9UN81 338 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
COL5A1-207ENST00000469093 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
COL5A1-207ENST00000469093 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms