RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CHD7Q9P2D1 2997 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 C5orf67F2Z3F1 127 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 THAP12O43422 761 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 IPO7O95373 1038 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 PAEPP09466 180 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 PNMA6AP0CW24 399 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 POU3F3P20264 500 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 FGFR3P22607 806 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 ACAT1P24752 427 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 ADKP55263 362 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 PSMC1P62191 440 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 CYP27A1Q02318 531 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 ORC1Q13415 861 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 GPM6BQ13491 265 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 SMC1AQ14683 1233 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 STILQ15468 1287 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 PTPROQ16827 1216 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 PLPP4Q5VZY2 271 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 SCARA3Q6AZY7 606 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 C4orf50Q6ZRC1 276 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 ACOT1Q86TX2 421 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 B3GALNT2Q8NCR0 500 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 BCL7CQ8WUZ0 217 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 POF1BQ8WVV4 589 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 KBTBD7Q8WVZ9 684 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 PIK3R5Q8WYR1 880 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 B3GALT6Q96L58 329 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 TCF25Q9BQ70 676 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 NAA15Q9BXJ9 866 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 EMILIN2Q9BXX0 1053 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 TTYH3Q9C0H2 523 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 SDCBP2Q9H190 292 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 ALG13Q9NP73 1137 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 ABHD10Q9NUJ1 306 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 MTCH2Q9Y6C9 303 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 BZW2Q9Y6E2 419 aaKnown RBP8.64□□□□□ -1.03
HDAC6-216ENST00000468949 TRIP11Q15643 1979 aa8.64□□□□□ -1.03
HDAC6-216ENST00000468949 MYO9BQ13459 2157 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 M0QYV0 167 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 RFXAPO00287 272 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 FOXN3O00409 490 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 CYP26A1O43174 497 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 SERPING1P05155 500 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 ADH1AP07327 375 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 CTSAP10619 480 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 VDRP11473 427 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 JAM2P57087 298 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 DSG1Q02413 1049 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 NFE2Q16621 373 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 SLC39A12Q504Y0 691 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 MDH1BQ5I0G3 518 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 RTP2Q5QGT7 225 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 TAF3Q5VWG9 929 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 PDE12Q6L8Q7 609 aaKnown RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 ELMSAN1Q6PJG2 1045 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 PRSS55Q6UWB4 352 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 SPATA2LQ8IUW3 424 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 GLYCTKQ8IVS8 523 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 FAM71AQ8IYT1 594 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 MSANTD4Q8NCY6 345 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 CCDC112Q8NEF3 446 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 PPM1EQ8WY54 764 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 BAP1Q92560 729 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 SYN2Q92777 582 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 TRIM44Q96DX7 344 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 PANX2Q96RD6 677 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 ACBD6Q9BR61 282 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 LMAN2LQ9H0V9 348 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 ZBP1Q9H171 429 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 NGRNQ9NPE2 291 aaKnown RBP8.63□□□□□ -1.03
HDAC6-216ENST00000468949 FAM49BQ9NUQ9 324 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 LMCD1Q9NZU5 365 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 HMGXB4Q9UGU5 601 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 KIAA1257Q9ULG3 409 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 CDY1Q9Y6F8 540 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 CDH23Q9H251 3354 aa8.63□□□□□ -1.03
HDAC6-216ENST00000468949 ATG2AQ2TAZ0 1938 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 H3BNC9 293 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 GABRDO14764 452 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 OAZ2O95190 189 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 CXCL14O95715 111 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 FAM200BP0CF97 657 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 CYP11B1P15538 503 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 PTPN1P18031 435 aaKnown RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 ACO1P21399 889 aaKnown RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 TNFAIP3P21580 790 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 IGFBP6P24592 240 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 KLRC2P26717 231 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 ANXA13P27216 316 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 ADORA2BP29275 332 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 ELF1P32519 619 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 CYLC1P35663 651 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-216ENST00000468949 NDUFV1P49821 464 aa8.62□□□□□ -1.03
HDAC6-216ENST00000468949 BCAT1P54687 386 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms