RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 KRT28Q7Z3Y7 464 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 VPS36Q86VN1 386 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CCDC89Q8N998 374 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TMEM102Q8N9M5 508 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 SNX29Q8TEQ0 813 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 RASSF5Q8WWW0 418 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 GAB3Q8WWW8 586 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 BSNDQ8WZ55 320 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 BORCS5Q969J3 196 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ABTB1Q969K4 478 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 MCUR1Q96AQ8 359 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 GPRASP2Q96D09 838 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 SLC39A13Q96H72 371 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CCDC138Q96M89 665 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TCEANC2Q96MN5 208 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TTC25Q96NG3 672 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 FNBP1Q96RU3 617 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ECSITQ9BQ95 431 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 FAM83CQ9BQN1 747 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 RIOK1Q9BRS2 568 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TUBGCP2Q9BSJ2 902 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 NACAP1Q9BZK3 213 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 KANSL2Q9H9L4 492 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 PARVGQ9HBI0 331 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 SLC38A10Q9HBR0 1119 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TRPC7Q9HCX4 862 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CD209Q9NNX6 404 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 DIABLOQ9NR28 239 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 HOMER2Q9NSB8 354 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 NDE1Q9NXR1 346 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 STK32BQ9NY57 414 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TAB2Q9NYJ8 693 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 C9orf78Q9NZ63 289 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TBC1D7Q9P0N9 293 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 EPS15L1Q9UBC2 864 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 HSFX1Q9UBD0 423 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CRNNQ9UBG3 495 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 NKX1-2Q9UD57 310 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 BCAP29Q9UHQ4 241 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ANGEL1Q9UNK9 670 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 SMG5Q9UPR3 1016 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CTNND2Q9UQB3 1225 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 PRELID1Q9Y255 219 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 B3GNT3Q9Y2A9 372 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF652Q9Y2D9 606 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 SNX9Q9Y5X1 595 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 AK5Q9Y6K8 562 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 LRRC37A3O60309 1634 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 LAMA4Q16363 1823 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 A0A0U1RQJ8 604 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 IQANK1A0A1B0GTG1 560 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DYTNA2CJ06 578 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 KIAA1324LA8MWY0 1029 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 BTBD18B2RXH4 712 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 TMEM114B3SHH9 223 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 TCP11X1B4DZS4 312 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 KRIT1O00522 736 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DDX3XO00571 662 aaKnown RBP eCLIP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 FBP2O00757 339 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 XPO1O14980 1071 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MCF2LO15068 1137 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 KMOO15229 486 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DENRO43583 198 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ADCY3O60266 1144 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 TRMUO75648 421 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 TNFAIP8O95379 198 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MOCS3O95396 460 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DEXIO95424 95 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 CLPTM1O96005 669 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 LDHAP00338 332 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 TFRCP02786 760 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MMP1P03956 469 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ALOX5P09917 674 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 HSPA8P11142 646 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 EDN3P14138 238 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 UQCRBP14927 111 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 IFNAR1P17181 557 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 RPL17P18621 184 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 CDC25CP30307 473 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 HMOX2P30519 316 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 S100A5P33763 92 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MAN1A1P33908 653 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 LONP1P36776 959 aaKnown RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 PCYT1AP49585 367 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 NT5C2P49902 561 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MXI1P50539 228 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 NR1H2P55055 460 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ATP6V0D1P61421 351 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 PLOD1Q02809 727 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 CREB5Q02930 508 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 CDK18Q07002 472 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 DNAJC3Q13217 504 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 MSLNQ13421 630 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 RAPGEF1Q13905 1077 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 LPIN1Q14693 890 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ARL13BQ3SXY8 428 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 ARSHQ5FYA8 562 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 HERC4Q5GLZ8 1057 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-207ENST00000468925 OLFML2BQ68BL8 750 aa5.11□□□□□ -1.59
SF3B1-207ENST00000468925 CCDC62Q6P9F0 684 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms