RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ZNF461Q8TAF7 563 aa12□□□□□ -0.49
MSH5-214ENST00000468602 RIN2Q8WYP3 895 aaPredicted RBP12□□□□□ -0.49
MSH5-214ENST00000468602 DDX1Q92499 740 aaKnown RBP12□□□□□ -0.49
MSH5-214ENST00000468602 SPAG5Q96R06 1193 aa12□□□□□ -0.49
MSH5-214ENST00000468602 TWNKQ96RR1 684 aa12□□□□□ -0.49
MSH5-214ENST00000468602 SYT15Q9BQS2 421 aa12□□□□□ -0.49
MSH5-214ENST00000468602 ELOVL4Q9GZR5 314 aa12□□□□□ -0.49
MSH5-214ENST00000468602 TTYH1Q9H313 450 aaPredicted RBP12□□□□□ -0.49
MSH5-214ENST00000468602 CSNK1G1Q9HCP0 422 aa12□□□□□ -0.49
MSH5-214ENST00000468602 ALG13Q9NP73 1137 aaKnown RBP12□□□□□ -0.49
MSH5-214ENST00000468602 PNPLA8Q9NP80 782 aa12□□□□□ -0.49
MSH5-214ENST00000468602 CRTAC1Q9NQ79 661 aa12□□□□□ -0.49
MSH5-214ENST00000468602 AFF4Q9UHB7 1163 aaKnown RBP12□□□□□ -0.49
MSH5-214ENST00000468602 MYO7AQ13402 2215 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 MFAP3LO75121 409 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 ATF2P15336 505 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 CASP14P31944 242 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 CDH5P33151 784 aaPredicted RBP11.99□□□□□ -0.49
MSH5-214ENST00000468602 TSPY1Q01534 308 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 PTK2Q05397 1052 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 CTXN3Q4LDR2 81 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 HGSNATQ68CP4 663 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 LCLAT1Q6UWP7 414 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 VSTM1Q6UX27 236 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 RSPO2Q6UXX9 243 aaPredicted RBP11.99□□□□□ -0.49
MSH5-214ENST00000468602 C4orf50Q6ZRC1 276 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 CACNA2D4Q7Z3S7 1137 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 TMC7Q7Z402 723 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 LRRTM3Q86VH5 581 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 TCEAL8Q8IYN2 117 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 TC2NQ8N9U0 490 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 OR8K1Q8NGG5 319 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 SPPL2BQ8TCT7 592 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 EPS8L1Q8TE68 723 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 PANX2Q96RD6 677 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 TCF25Q9BQ70 676 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 EMILIN2Q9BXX0 1053 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 LHX5Q9H2C1 402 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 HMGXB4Q9UGU5 601 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
MSH5-214ENST00000468602 TIMM13Q9Y5L4 95 aaPredicted RBP11.99□□□□□ -0.49
MSH5-214ENST00000468602 COL4A4P53420 1690 aaPredicted RBP11.99□□□□□ -0.49
MSH5-214ENST00000468602 SSU72P8A0A1W2PR75 194 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 LRRC53A6NM62 1247 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 AKR1B15C9JRZ8 316 aaPredicted RBP11.98□□□□□ -0.49
MSH5-214ENST00000468602 O00370 1275 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 SOX1O00570 391 aaPredicted RBP11.98□□□□□ -0.49
MSH5-214ENST00000468602 TEX28O15482 410 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 VNN2O95498 520 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 CXCL14O95715 111 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 ADH1AP07327 375 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 TPM1P09493 284 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 CNPP09543 421 aaKnown RBP11.98□□□□□ -0.49
MSH5-214ENST00000468602 CYP11B1P15538 503 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 HOXA9P31269 272 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 KRT9P35527 623 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 RAP1GAPP47736 663 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 GSDMDP57764 484 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 ROR1Q01973 937 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 MAPK8IP2Q13387 824 aaPredicted RBP11.98□□□□□ -0.49
MSH5-214ENST00000468602 RAPGEF1Q13905 1077 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 WDR59Q6PJI9 974 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 PAQR9Q6ZVX9 377 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 TMC6Q7Z403 805 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 OLIG1Q8TAK6 271 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 STK32AQ8WU08 396 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 SLC22A17Q8WUG5 538 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 ZNF606Q8WXB4 792 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 ARNTL2Q8WYA1 636 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 ELMO3Q96BJ8 720 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
MSH5-214ENST00000468602 ZNF518BQ9C0D4 1074 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 NLRC4Q9NPP4 1024 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 CYLDQ9NQC7 956 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 ABHD10Q9NUJ1 306 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 NOCTQ9UK39 431 aaKnown RBP11.98□□□□□ -0.49
MSH5-214ENST00000468602 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
MSH5-214ENST00000468602 WDR27A2RRH5 827 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 MYBPHLA2RUH7 354 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 MTMR11A4FU01 709 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 CYP26A1O43174 497 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 MED7O43513 233 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 NCK2O43639 380 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 LSM8O95777 96 aaKnown RBP11.97□□□□□ -0.49
MSH5-214ENST00000468602 SETSIPP0DME0 302 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 CD58P19256 250 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 OR1D2P34982 312 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 IRS1P35568 1242 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 CLCN4P51793 760 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 DUSP6Q16828 381 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 ARHGAP44Q17R89 818 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 ASTE1Q2TB18 679 aaPredicted RBP11.97□□□□□ -0.49
MSH5-214ENST00000468602 SGO2Q562F6 1265 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 SFMBT2Q5VUG0 894 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 PPP1R2P3Q6NXS1 205 aa11.97□□□□□ -0.49
MSH5-214ENST00000468602 PRSS55Q6UWB4 352 aaPredicted RBP11.97□□□□□ -0.49
MSH5-214ENST00000468602 CEP57Q86XR8 500 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms