RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 KCNU1A8MYU2 1149 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 SMIM22K7EJ46 135 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 ARIH2O95376 493 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 CCKARP32238 428 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 KIF22Q14807 665 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 RBM20Q5T481 1227 aaKnown RBP4.44□□□□□ -1.7
SSB-208ENST00000468600 TEDDM1Q5T9Z0 273 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 TAF2Q6P1X5 1199 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 ANKRD16Q6P6B7 361 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 ZNF804AQ7Z570 1209 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 FAM90A1Q86YD7 464 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 CNGA4Q8IV77 575 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 SMRP1Q8NCR6 262 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 PSD4Q8NDX1 1056 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 ATRIPQ8WXE1 791 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 FAM136AQ96C01 138 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 SMOC2Q9H3U7 446 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 MTMR4Q9NYA4 1195 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 DKK3Q9UBP4 350 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 SERPINB13Q9UIV8 391 aa4.44□□□□□ -1.7
SSB-208ENST00000468600 ZNF785A8K8V0 405 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 TISP43B9A030 160 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 GABRDO14764 452 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 XPOTO43592 962 aaKnown RBP4.43□□□□□ -1.7
SSB-208ENST00000468600 MT-CO1P00395 513 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 RARBP10826 455 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 JUPP14923 745 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 ITGALP20701 1170 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 PRDX5P30044 214 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 PIK3CGP48736 1102 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 TOB1P50616 345 aaPredicted RBP4.43□□□□□ -1.7
SSB-208ENST00000468600 ZNF135P52742 658 aaPredicted RBP4.43□□□□□ -1.7
SSB-208ENST00000468600 RABEP1Q15276 862 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 TBCCQ15814 346 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 ZNF618Q5T7W0 954 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 SLC30A10Q6XR72 485 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 DTX2Q86UW9 622 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 C3orf20Q8ND61 904 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 FBXO41Q8TF61 875 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 DDX17Q92841 729 aaKnown RBP4.43□□□□□ -1.7
SSB-208ENST00000468600 REPS1Q96D71 796 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 TMEM79Q9BSE2 394 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 SLC13A1Q9BZW2 595 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 PRSS22Q9GZN4 317 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 VPS33BQ9H267 617 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 ARHGEF3Q9NR81 526 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 TRHDEQ9UKU6 1024 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 ZDHHC8Q9ULC8 765 aa4.43□□□□□ -1.7
SSB-208ENST00000468600 FNDC1Q4ZHG4 1894 aaPredicted RBP4.43□□□□□ -1.7
SSB-208ENST00000468600 CCDC187A0A096LP49 1063 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 MYO1FO00160 1098 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 ZNF213O14771 459 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 SLC16A6O15403 523 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 FAM163BP0C2L3 166 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 MYBL2P10244 700 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 SMARCA1P28370 1054 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 CD6P30203 668 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 PSMC1P62191 440 aaKnown RBP4.42□□□□□ -1.7
SSB-208ENST00000468600 MTMR1Q13613 665 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 PCBP2Q15366 365 aaKnown RBP eCLIP4.42□□□□□ -1.7
SSB-208ENST00000468600 AARS2Q5JTZ9 985 aaKnown RBP4.42□□□□□ -1.7
SSB-208ENST00000468600 KIAA1161Q6NSJ0 714 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 WDR53Q7Z5U6 358 aaPredicted RBP4.42□□□□□ -1.7
SSB-208ENST00000468600 FANCBQ8NB91 859 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 KLHDC4Q8TBB5 520 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 WDCPQ9H6R7 721 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 SPC25Q9HBM1 224 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 MRPS18AQ9NVS2 196 aaKnown RBP4.42□□□□□ -1.7
SSB-208ENST00000468600 USP35Q9P2H5 1018 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 SH2B3Q9UQQ2 575 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 RAD54BQ9Y620 910 aa4.42□□□□□ -1.7
SSB-208ENST00000468600 PRRT4C9JH25 899 aa4.41□□□□□ -1.7
SSB-208ENST00000468600 SFPQP23246 707 aaKnown RBP eCLIP4.41□□□□□ -1.7
SSB-208ENST00000468600 ARHGAP25P42331 645 aa4.41□□□□□ -1.7
SSB-208ENST00000468600 ALDH9A1P49189 494 aa4.41□□□□□ -1.7
SSB-208ENST00000468600 TRIP6Q15654 476 aaKnown RBP4.41□□□□□ -1.7
SSB-208ENST00000468600 UAP1L1Q3KQV9 507 aa4.41□□□□□ -1.7
SSB-208ENST00000468600 THEMIS2Q5TEJ8 643 aa4.41□□□□□ -1.7
SSB-208ENST00000468600 EFCAB2Q5VUJ9 269 aa4.41□□□□□ -1.7
SSB-208ENST00000468600 SFRP4Q6FHJ7 346 aaPredicted RBP4.41□□□□□ -1.7
SSB-208ENST00000468600 TINAGL1Q9GZM7 467 aaPredicted RBP4.41□□□□□ -1.7
SSB-208ENST00000468600 AGAP1Q9UPQ3 857 aa4.41□□□□□ -1.7
SSB-208ENST00000468600 NOTCH4Q99466 2003 aa4.4□□□□□ -1.7
SSB-208ENST00000468600 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 SMIM35A0A1B0GVV1 85 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 SOCS2O14508 198 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 TLR5O60602 858 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 DNAJB5O75953 348 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 GCLCP48506 637 aaPredicted RBP4.4□□□□□ -1.71
SSB-208ENST00000468600 ZNF134P52741 427 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 HK3P52790 923 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 LRRC41Q15345 812 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 ABCB5Q2M3G0 1257 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 VPS53Q5VIR6 699 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 USP37Q86T82 979 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 GALNT16Q8N428 558 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 PRSS3P2Q8NHM4 247 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 NSMCE1Q8WV22 266 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 SERHLQ9NQF3 203 aa4.4□□□□□ -1.71
SSB-208ENST00000468600 H0YIZ8 118 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms