RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ENPP3O14638 875 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 DDX3YO15523 660 aaKnown RBP8.77□□□□□ -1.01
BRCA1-208ENST00000468300 GPD2P43304 727 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 TNNC1P63316 161 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 PLEKHA7Q6IQ23 1121 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 TRIM72Q6ZMU5 477 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 SLC24A5Q71RS6 500 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 TXLNBQ8N3L3 684 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 CTNNBL1Q8WYA6 563 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-208ENST00000468300 SCLYQ96I15 445 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 TOX2Q96NM4 488 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 MMS19Q96T76 1030 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 CARD6Q9BX69 1037 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 HYOU1Q9Y4L1 999 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 VWA8A3KMH1 1905 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 COL4A4P53420 1690 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-208ENST00000468300 PTPRDP23468 1912 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TLR3O15455 904 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 DDHD2O94830 711 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 MICAL2O94851 1124 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 LSM8O95777 96 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 POMCP01189 267 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ITGB1P05556 798 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ZNF252P-AS1Q0IIN9 211 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 MAMLD1Q13495 774 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PTPROQ16827 1216 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 MMS22LQ6ZRQ5 1243 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 RSRC2Q7L4I2 434 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ZNF572Q7Z3I7 529 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PHLDB2Q86SQ0 1253 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ZNF280BQ86YH2 543 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 DBF4BQ8NFT6 615 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 OSBPL9Q96SU4 736 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 RTP3Q9BQQ7 232 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 NUP85Q9BW27 656 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 AVENQ9NQS1 362 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 EHD2Q9NZN4 543 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TBX21Q9UL17 535 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TTC3P53804 2025 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PODXLO00592 558 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TADA3O75528 432 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 GJB6O95452 261 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 EOMESO95936 686 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 WARSP23381 471 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 CXCR5P32302 372 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PNPLA4P41247 253 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TAF6P49848 677 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 YWHAEP62258 255 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 DSC1Q08554 894 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 CNGA2Q16280 664 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 LRRC26Q2I0M4 334 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PTPN20Q4JDL3 420 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 C16orf87Q6PH81 154 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 LCLAT1Q6UWP7 414 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 RHOT2Q8IXI1 618 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 CRYBG2Q8N1P7 616 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ZNF653Q96CK0 615 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 VCPIP1Q96JH7 1222 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 CPXM1Q96SM3 734 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ARPC5LQ9BPX5 153 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 FAM117AQ9C073 453 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 SAR1BQ9Y6B6 198 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 UQCRHLA0A096LP55 91 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 CASTOR2A6NHX0 329 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TULP2O00295 520 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 SLU7O95391 586 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 UQCRHP07919 91 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 VDRP11473 427 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 P4HA1P13674 534 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 GABRB2P47870 512 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TLE2Q04725 743 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 C1QBPQ07021 282 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 C11orf63Q6NUN7 778 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PAQR9Q6ZVX9 377 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ACOT1Q86TX2 421 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 TOP6BLQ8N6T0 577 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ALS2CR12Q96Q35 445 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 NT5C1AQ9BXI3 368 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 SMARCAL1Q9NZC9 954 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 CNOT8Q9UFF9 292 aaKnown RBP8.76□□□□□ -1.01
BRCA1-208ENST00000468300 PATJQ8NI35 1801 aa8.76□□□□□ -1.01
BRCA1-208ENST00000468300 ERBB2P04626 1255 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 TKTP29401 623 aaKnown RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 NOP2P46087 812 aaKnown RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 GSCP56915 257 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 OGDHQ02218 1023 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 BFSP2Q13515 415 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 SV2CQ496J9 727 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 TIGD5Q53EQ6 642 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 UNC93AQ86WB7 457 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 ZNF560Q96MR9 790 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 C11orf70Q9BRQ4 267 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 ZNF518BQ9C0D4 1074 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 SLC38A7Q9NVC3 462 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 ALG6Q9Y672 507 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 XPOTO43592 962 aaKnown RBP8.75□□□□□ -1.01
BRCA1-208ENST00000468300 ATP2C2O75185 946 aa8.75□□□□□ -1.01
BRCA1-208ENST00000468300 SKIP12755 728 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms