RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 WARSP23381 471 aaKnown RBP18.32■□□□□ 0.52
SSBP1-207ENST00000468267 GABRR2P28476 465 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 VIPR2P41587 438 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 CASP4P49662 377 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 AP3M2P53677 418 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 SNW1Q13573 536 aaKnown RBP18.32■□□□□ 0.52
SSBP1-207ENST00000468267 KCNB1Q14721 858 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 FAM171BQ6P995 826 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 FMR1NBQ8N0W7 255 aaPredicted RBP18.32■□□□□ 0.52
SSBP1-207ENST00000468267 GIPC2Q8TF65 315 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 MMS19Q96T76 1030 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 IRF2BPLQ9H1B7 796 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 ATXN3LQ9H3M9 355 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 SLITRK6Q9H5Y7 841 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 IL21Q9HBE4 155 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 GTF3C4Q9UKN8 822 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 TRAF3IP3Q9Y228 551 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 ZNF638Q14966 1978 aaKnown RBP18.31■□□□□ 0.52
SSBP1-207ENST00000468267 CACNA1IQ9P0X4 2223 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 MIA3Q5JRA6 1907 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 MYBPHLA2RUH7 354 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 GOLGA6L4A6NEF3 574 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 LRRIQ3A6PVS8 624 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-207ENST00000468267 CALUO43852 315 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-207ENST00000468267 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
SSBP1-207ENST00000468267 FAM163BP0C2L3 166 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 CYP2F1P24903 491 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 LMO2P25791 158 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 PRKCQQ04759 706 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 TRPC3Q13507 836 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 MLF2Q15773 248 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-207ENST00000468267 TAF12Q16514 161 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 STXBP5Q5T5C0 1151 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 VITQ6UXI7 678 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 E2F7Q96AV8 911 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 CCDC34Q96HJ3 373 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 TRMT61BQ9BVS5 477 aaKnown RBP18.31■□□□□ 0.52
SSBP1-207ENST00000468267 XYLT2Q9H1B5 865 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 CDH9Q9ULB4 789 aa18.31■□□□□ 0.52
SSBP1-207ENST00000468267 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-207ENST00000468267 PTPRDP23468 1912 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 PHACTR2O75167 634 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 ATP2C2O75185 946 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 TACC1O75410 805 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 HMGA1P17096 107 aaKnown RBP18.3■□□□□ 0.52
SSBP1-207ENST00000468267 PSMC3P17980 439 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 CDC25CP30307 473 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 ATICP31939 592 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 MYL6P60660 151 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 GRM2Q14416 872 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 NFIL3Q16649 462 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 CCDC142Q17RM4 750 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 WDR72Q3MJ13 1102 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 CFAP221Q4G0U5 840 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 ARHGAP15Q53QZ3 475 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 GPR158Q5T848 1215 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 SPATA2LQ8IUW3 424 aaPredicted RBP18.3■□□□□ 0.52
SSBP1-207ENST00000468267 MFSD6LQ8IWD5 586 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 CCDC105Q8IYK2 499 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 GUF1Q8N442 669 aaKnown RBP18.3■□□□□ 0.52
SSBP1-207ENST00000468267 DTWD2Q8NBA8 298 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 FUBP3Q96I24 572 aaKnown RBP eCLIP18.3■□□□□ 0.52
SSBP1-207ENST00000468267 SYT15Q9BQS2 421 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 MKNK1Q9BUB5 465 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 DDX23Q9BUQ8 820 aaKnown RBP18.3■□□□□ 0.52
SSBP1-207ENST00000468267 MAPK8IP1Q9UQF2 711 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 SIT1Q9Y3P8 196 aa18.3■□□□□ 0.52
SSBP1-207ENST00000468267 GREB1Q4ZG55 1949 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 HEPACAM2A8MVW5 462 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 H0Y858 1186 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 C4BPAP04003 597 aaKnown RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 PDGFRBP09619 1106 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 WEE1P30291 646 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 GNL1P36915 607 aaPredicted RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 GPR15P49685 360 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 RPL10AP62906 217 aaKnown RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 TNNC1P63316 161 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 DDR2Q16832 855 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 TDRD10Q5VZ19 366 aaKnown RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 ARID3BQ8IVW6 561 aaPredicted RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 ENGASEQ8NFI3 743 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 TMC2Q8TDI7 906 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 DEPDC1BQ8WUY9 529 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 DNASE1L2Q92874 299 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 RSPRY1Q96DX4 576 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 MRPL45Q9BRJ2 306 aaKnown RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 FOXQ1Q9C009 403 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 SNX25Q9H3E2 840 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 TASP1Q9H6P5 420 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 BRD9Q9H8M2 597 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 VRTNQ9H8Y1 702 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 CRTAC1Q9NQ79 661 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 FRMD4BQ9Y2L6 1034 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 RIF1Q5UIP0 2472 aaKnown RBP18.29■□□□□ 0.52
SSBP1-207ENST00000468267 OBSL1O75147 1896 aa18.29■□□□□ 0.52
SSBP1-207ENST00000468267 NCANO14594 1321 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 TICRRQ7Z2Z1 1910 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 KANSL1LA0AUZ9 987 aa18.28■□□□□ 0.52
SSBP1-207ENST00000468267 MAPK13O15264 365 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms