RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 YIPF1Q9Y548 306 aa21.39■■□□□ 1.01
NPHP4-206ENST00000468253 A8MXQ7 604 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 PRKCSHP14314 528 aaPredicted RBP21.38■■□□□ 1.01
NPHP4-206ENST00000468253 PTPN1P18031 435 aaKnown RBP21.38■■□□□ 1.01
NPHP4-206ENST00000468253 FSHRP23945 695 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 MAGEA11P43364 429 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 FMO5P49326 533 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 EPHA5P54756 1037 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 CDH8P55286 799 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 NOP14P78316 857 aaKnown RBP21.38■■□□□ 1.01
NPHP4-206ENST00000468253 PABPC1LQ4VXU2 614 aaKnown RBP21.38■■□□□ 1.01
NPHP4-206ENST00000468253 SASS6Q6UVJ0 657 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 CRYBG2Q8N1P7 616 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 CEP295NLQ96MC4 621 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 PI4K2AQ9BTU6 479 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 NIF3L1Q9GZT8 377 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 THAP9Q9H5L6 903 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 SMYD3Q9H7B4 428 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 APOBEC3GQ9HC16 384 aaKnown RBP21.38■■□□□ 1.01
NPHP4-206ENST00000468253 ANO10Q9NW15 660 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 EPS15L1Q9UBC2 864 aa21.38■■□□□ 1.01
NPHP4-206ENST00000468253 TCF20Q9UGU0 1960 aaKnown RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 PLXNA3P51805 1871 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 C2CD4DB7Z1M9 353 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 ATP2C2O75185 946 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 RHOP08100 348 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 ASPAP45381 313 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 RPL10AP62906 217 aaKnown RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 KCNH2Q12809 1159 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 TPD52L1Q16890 204 aaPredicted RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 CYP4A22Q5TCH4 519 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 VSTM1Q6UX27 236 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 DNAJB7Q7Z6W7 309 aaPredicted RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 ITIH5Q86UX2 942 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 IRF2BP1Q8IU81 584 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 SPATA2LQ8IUW3 424 aaPredicted RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 TDRD5Q8NAT2 981 aaKnown RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 NXPE3Q969Y0 559 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 TNIP3Q96KP6 325 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 CRTAC1Q9NQ79 661 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 ABI2Q9NYB9 513 aaPredicted RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 MAGEC2Q9UBF1 373 aaPredicted RBP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 NME7Q9Y5B8 376 aa21.37■■□□□ 1.01
NPHP4-206ENST00000468253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.37■■□□□ 1.01
NPHP4-206ENST00000468253 INCA1Q0VD86 236 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 MGAT5BQ3V5L5 792 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 SPOPLQ6IQ16 392 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 RNF135Q8IUD6 432 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 FAM114A1Q8IWE2 563 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 ENOX1Q8TC92 643 aaKnown RBP21.36■■□□□ 1.01
NPHP4-206ENST00000468253 PSMG2Q969U7 264 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 DNAI2Q9GZS0 605 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 SDCBP2Q9H190 292 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 DNAJC25Q9H1X3 360 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 HCFC1R1Q9NWW0 138 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 C5orf42Q9H799 3197 aa21.36■■□□□ 1.01
NPHP4-206ENST00000468253 HCRTO43612 131 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 FGF19O95750 216 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 AFPP02771 609 aaKnown RBP21.35■■□□□ 1.01
NPHP4-206ENST00000468253 LAMP2P13473 410 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 NTHL1P78549 312 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 TTC9BQ8N6N2 239 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 B3GALNT2Q8NCR0 500 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 SEPT5Q99719 369 aaPredicted RBP21.35■■□□□ 1.01
NPHP4-206ENST00000468253 CORO1BQ9BR76 489 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 LRRC3Q9BY71 257 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 GDE1Q9NZC3 331 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 TMEM63CQ9P1W3 806 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 CDH7Q9ULB5 785 aa21.35■■□□□ 1.01
NPHP4-206ENST00000468253 MRPS23Q9Y3D9 190 aaKnown RBP21.35■■□□□ 1.01
NPHP4-206ENST00000468253 LRRN2O75325 713 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 CLSTN1O94985 981 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 LETM1O95202 739 aaPredicted RBP21.34■■□□□ 1.01
NPHP4-206ENST00000468253 TRIM21P19474 475 aaKnown RBP21.34■■□□□ 1.01
NPHP4-206ENST00000468253 CYP2F1P24903 491 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 VEPH1Q14D04 833 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 KLHL40Q2TBA0 621 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 PRSS36Q5K4E3 855 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 PDZD4Q76G19 769 aaPredicted RBP21.34■■□□□ 1.01
NPHP4-206ENST00000468253 EHBP1Q8NDI1 1231 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 ELMO3Q96BJ8 720 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 PCED1BQ96HM7 432 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 CNOT6LQ96LI5 555 aaKnown RBP21.34■■□□□ 1.01
NPHP4-206ENST00000468253 MYADMQ96S97 322 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 ASAH2Q9NR71 780 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 LIMD1Q9UGP4 676 aa21.34■■□□□ 1.01
NPHP4-206ENST00000468253 PI4K2BG5E9Z4 385 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 ALADP13716 330 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 GBP2P32456 591 aaPredicted RBP21.33■■□□□ 1.01
NPHP4-206ENST00000468253 NDST1P52848 882 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 PSMC1P62191 440 aaKnown RBP21.33■■□□□ 1.01
NPHP4-206ENST00000468253 SCARA5Q6ZMJ2 495 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 LMO3Q8TAP4 145 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 ITFG1Q8TB96 612 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 FGF13Q92913 245 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 TATDN2Q93075 761 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 SPATA17Q96L03 361 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 NT5C1AQ9BXI3 368 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 GPR88Q9GZN0 384 aa21.33■■□□□ 1.01
NPHP4-206ENST00000468253 IGSF9Q9P2J2 1179 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms