RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 HELZP42694 1942 aaKnown RBP11.15□□□□□ -0.62
HDAC3-203ENST00000467533 ANTXRLA6NF34 631 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 TRABD2BA6NFA1 517 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 M0QZQ0 153 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 LARGE1O95461 756 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 HMGB1P09429 215 aaKnown RBP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 HARSP12081 509 aaKnown RBP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 HNRNPLP14866 589 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 ATF6P18850 670 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 DDX6P26196 483 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 EFNA5P52803 228 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 CFHR1Q03591 330 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 SSRP1Q08945 709 aaKnown RBP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 NR1H3Q13133 447 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 MYBPC2Q14324 1141 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 KRT32Q14532 448 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 NPY5RQ15761 445 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 MAP7D1Q3KQU3 841 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 OVOS1Q6IE37 1185 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 GALNT17Q6IS24 598 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 ARMCX5Q6P1M9 558 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 DSTYKQ6XUX3 929 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 MARCH9Q86YJ5 346 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 OSCP1Q8WVF1 389 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 MRPS31Q92665 395 aaKnown RBP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 FCRL3Q96P31 734 aaPredicted RBP11.14□□□□□ -0.63
HDAC3-203ENST00000467533 ACAP3Q96P50 834 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 HSD17B14Q9BPX1 270 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 TNFSF13BQ9Y275 285 aa11.14□□□□□ -0.63
HDAC3-203ENST00000467533 ANK1P16157 1881 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 TCRBV21S2A2A0A5A6 115 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 K7EQS6 105 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 GJB3O75712 270 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 DEXIO95424 95 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 KLF8O95600 359 aaPredicted RBP11.13□□□□□ -0.63
HDAC3-203ENST00000467533 ITPKBP27987 946 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 TUFMP49411 452 aaKnown RBP11.13□□□□□ -0.63
HDAC3-203ENST00000467533 CDR1P51861 262 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 ZNF33AQ06730 810 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 ZNF268Q14587 947 aaPredicted RBP11.13□□□□□ -0.63
HDAC3-203ENST00000467533 PLEKHG6Q3KR16 790 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 TXNDC8Q6A555 127 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 LRRC69Q6ZNQ3 347 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 GLRX5Q86SX6 157 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 GALNT15Q8N3T1 639 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 ALLCQ8N6M5 410 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 TXNDC5Q8NBS9 432 aaKnown RBP11.13□□□□□ -0.63
HDAC3-203ENST00000467533 SETD7Q8WTS6 366 aaKnown RBP11.13□□□□□ -0.63
HDAC3-203ENST00000467533 IFT74Q96LB3 600 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 PRORYQ9H606 182 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 HSFX1Q9UBD0 423 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 KCNJ14Q9UNX9 436 aa11.13□□□□□ -0.63
HDAC3-203ENST00000467533 PHLPP2Q6ZVD8 1323 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 CAPN8A6NHC0 703 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 GOLGA8CPA6NN73 597 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 K7ERI5 159 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 SGK1O00141 431 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 TIE1P35590 1138 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 NLRP12P59046 1061 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 MRPS21P82921 87 aaKnown RBP11.12□□□□□ -0.63
HDAC3-203ENST00000467533 USP4Q13107 963 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 ZNF77Q15935 545 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 EML3Q32P44 896 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 SLC39A12Q504Y0 691 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 SLC36A4Q6YBV0 504 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 TMEM150AQ86TG1 271 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 EFCAB13Q8IY85 973 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 RGL4Q8IZJ4 473 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 TMEM130Q8N3G9 435 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 TRPC7Q9HCX4 862 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 KIAA1522Q9P206 1035 aaPredicted RBP11.12□□□□□ -0.63
HDAC3-203ENST00000467533 DACH1Q9UI36 760 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 PCOLCE2Q9UKZ9 415 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 PCDHA12Q9UN75 941 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 ASXL3Q9C0F0 2248 aa11.12□□□□□ -0.63
HDAC3-203ENST00000467533 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 FAM149AA5PLN7 773 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 ARHGEF35A5YM69 484 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 PYCARD-AS1I3L0S3 204 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 CBFA2T3O75081 653 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 NFATC1O95644 943 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 F11P03951 625 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 CKMP06732 381 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 MCF2P10911 925 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 ODC1P11926 461 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 XRCC6P12956 609 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDAC3-203ENST00000467533 OPRD1P41143 372 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 FAM160A1Q05DH4 1040 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
HDAC3-203ENST00000467533 CALCRLQ16602 461 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 EOGTQ5NDL2 527 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 PADI6Q6TGC4 694 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 MON1AQ86VX9 555 aa11.11□□□□□ -0.63
HDAC3-203ENST00000467533 PDCD7Q8N8D1 485 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms