RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 C1orf220Q5T0J3 134 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 UBXN11Q5T124 520 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 ZPBP2Q6X784 338 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-203ENST00000467514 C12orf50Q8NA57 414 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-203ENST00000467514 SMG8Q8ND04 991 aaKnown RBP11.85□□□□□ -0.51
PRPF3-203ENST00000467514 ZSWIM2Q8NEG5 633 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 KIAA1524Q8TCG1 905 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 PLEKHO2Q8TD55 490 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 CLDN23Q96B33 292 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 IQCDQ96DY2 449 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 MCRS1Q96EZ8 462 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 EIF2AQ9BY44 585 aaKnown RBP11.85□□□□□ -0.51
PRPF3-203ENST00000467514 HAPLN2Q9GZV7 340 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 FZD8Q9H461 694 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 MINDY3Q9H8M7 445 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 CAPN11Q9UMQ6 739 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 FRMD4BQ9Y2L6 1034 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 FAM208BQ5VWN6 2430 aa11.85□□□□□ -0.51
PRPF3-203ENST00000467514 TTC26A0AVF1 554 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 GTPBP10A4D1E9 387 aaKnown RBP11.84□□□□□ -0.51
PRPF3-203ENST00000467514 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 ABLIM1O14639 778 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 EPHB6O15197 1021 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 ZNF500O60304 480 aaPredicted RBP11.84□□□□□ -0.51
PRPF3-203ENST00000467514 FOXD2O60548 495 aaPredicted RBP11.84□□□□□ -0.51
PRPF3-203ENST00000467514 EXOC3O60645 756 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
PRPF3-203ENST00000467514 ADRB2P07550 413 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 TGM1P22735 817 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 AKAP5P24588 427 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 AXLP30530 894 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 CASP14P31944 242 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 ADKP55263 362 aaKnown RBP11.84□□□□□ -0.51
PRPF3-203ENST00000467514 GRIK3Q13003 919 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 TFDP1Q14186 410 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 HSP90AA2PQ14568 343 aaPredicted RBP11.84□□□□□ -0.51
PRPF3-203ENST00000467514 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 FAM171A1Q5VUB5 890 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 LILRA6Q6PI73 481 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 NPAS3Q8IXF0 933 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 CCDC112Q8NEF3 446 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 CCDC51Q96ER9 411 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 DNAJC7Q99615 494 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 TTPALQ9BTX7 342 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 NUP58Q9BVL2 599 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 C2orf40Q9H1Z8 148 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 NXF3Q9H4D5 531 aaKnown RBP11.84□□□□□ -0.51
PRPF3-203ENST00000467514 PCIF1Q9H4Z3 704 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 KCND1Q9NSA2 647 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 HCFC1R1Q9NWW0 138 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 KLK14Q9P0G3 267 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 GIT1Q9Y2X7 761 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 ATRXP46100 2492 aa11.84□□□□□ -0.51
PRPF3-203ENST00000467514 A0A0B4J269 797 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 PES1O00541 588 aaKnown RBP11.83□□□□□ -0.52
PRPF3-203ENST00000467514 HNRNPDLO14979 420 aaKnown RBP11.83□□□□□ -0.52
PRPF3-203ENST00000467514 KIAA0391O15091 583 aaKnown RBP11.83□□□□□ -0.52
PRPF3-203ENST00000467514 PMM2O15305 246 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 FAM189A1O60320 539 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 GDF9O60383 454 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 NOL4O94818 638 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 SKILP12757 684 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 PROZP22891 400 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 HOXA9P31269 272 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 HOXA11P31270 313 aaPredicted RBP11.83□□□□□ -0.52
PRPF3-203ENST00000467514 MBTD1Q05BQ5 628 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 BFSP1Q12934 665 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 STRN3Q13033 797 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 GRM2Q14416 872 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 CSRP2Q16527 193 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 AMHR2Q16671 573 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 FAM187BQ17R55 369 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 RTP2Q5QGT7 225 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 HEATR6Q6AI08 1181 aaKnown RBP11.83□□□□□ -0.52
PRPF3-203ENST00000467514 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 INTS8Q75QN2 995 aaKnown RBP11.83□□□□□ -0.52
PRPF3-203ENST00000467514 CBWD2Q8IUF1 395 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 CNGA4Q8IV77 575 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 GPR65Q8IYL9 337 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 NELL1Q92832 810 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 DNASE1L2Q92874 299 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 TARS2Q9BW92 718 aaKnown RBP11.83□□□□□ -0.52
PRPF3-203ENST00000467514 CHRDQ9H2X0 955 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 PTPRHQ9HD43 1115 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 PLCB1Q9NQ66 1216 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 MIOSQ9NXC5 875 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 USP20Q9Y2K6 914 aa11.83□□□□□ -0.52
PRPF3-203ENST00000467514 TICRRQ7Z2Z1 1910 aa11.82□□□□□ -0.52
PRPF3-203ENST00000467514 ACKR2O00590 384 aa11.82□□□□□ -0.52
PRPF3-203ENST00000467514 EXTL3O43909 919 aa11.82□□□□□ -0.52
PRPF3-203ENST00000467514 TSPAN1O60635 241 aa11.82□□□□□ -0.52
PRPF3-203ENST00000467514 ECI2O75521 394 aa11.82□□□□□ -0.52
PRPF3-203ENST00000467514 NPTXRO95502 500 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms