RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 A1BGP04217 495 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 DHRS4L1P0CG22 281 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 PECAM1P16284 738 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 FDXRP22570 491 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 PTDSS1P48651 473 aaKnown RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 TOB1P50616 345 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 ZNF134P52741 427 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 MXRA7P84157 204 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 MC2RQ01718 297 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 FOXL1Q12952 345 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 LIN54Q6MZP7 749 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 TAF2Q6P1X5 1199 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 LVRNQ6Q4G3 990 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 GPRIN1Q7Z2K8 1008 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 POLNQ7Z5Q5 900 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 ZFPM1Q8IX07 1006 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 ANKRD35Q8N283 1001 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 VGLL2Q8N8G2 317 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 DNERQ8NFT8 737 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 OR52N2Q8NGI0 321 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 PNISRQ8TF01 805 aaKnown RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 RUBCNQ92622 972 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 DDX17Q92841 729 aaKnown RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 KCNC2Q96PR1 638 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 TRIB1Q96RU8 372 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 PRPF18Q99633 342 aaKnown RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 SMOQ99835 787 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 CNPPD1Q9BV87 410 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 TEX101Q9BY14 249 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 SIK2Q9H0K1 926 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 EPS8L2Q9H6S3 715 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 MLXIPQ9HAP2 919 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 HEYLQ9NQ87 328 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 PLA2G3Q9NZ20 509 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 HSFX1Q9UBD0 423 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 RGS17Q9UGC6 210 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 ZMYND8Q9ULU4 1186 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 ZNF536O15090 1300 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 EIF3FO00303 357 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-209ENST00000467124 FCHO1O14526 889 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 AREL1O15033 823 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 CKBP12277 381 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 TPH1P17752 444 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 CNTFP26441 200 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 ATICP31939 592 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 APOBEC3AP31941 199 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-209ENST00000467124 CNR2P34972 360 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 SERPINF1P36955 418 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 CCT5P48643 541 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 RNASE9P60153 205 aaKnown RBP4.84□□□□□ -1.63
VPS13A-209ENST00000467124 NHLH2Q02577 135 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 ARHGEF7Q14155 803 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 PTCHD3Q3KNS1 767 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 TMTC4Q5T4D3 741 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 PLAG1Q6DJT9 500 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 CCDC70Q6NSX1 233 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 PPP1R32Q7Z5V6 425 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 SDR16C5Q8N3Y7 309 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 PSD4Q8NDX1 1056 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 MDGA1Q8NFP4 955 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 OR1N1Q8NGS0 311 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 FEZF2Q8TBJ5 459 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 TRAPPC12Q8WVT3 735 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 IPCEF1Q8WWN9 437 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-209ENST00000467124 GCC1Q96CN9 775 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 SNX27Q96L92 541 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 PPP1R9BQ96SB3 815 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 TMEM120AQ9BXJ8 343 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 ETAA1Q9NY74 926 aa4.84□□□□□ -1.63
VPS13A-209ENST00000467124 HECAQ9UBI9 543 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-209ENST00000467124 USP15Q9Y4E8 981 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-209ENST00000467124 LOC102723971A0A1B0GUV8 181 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 HMX3A6NHT5 357 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 RRN3P2A6NIE6 340 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 SYT5O00445 386 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 HNRNPDLO14979 420 aaKnown RBP4.83□□□□□ -1.64
VPS13A-209ENST00000467124 ZNF185O15231 689 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 CYP27B1O15528 508 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 RGS10O43665 173 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 MFAP3LO75121 409 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 ZSCAN22P10073 491 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-209ENST00000467124 SRGNP10124 158 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 CPT1AP50416 773 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 HSD11B2P80365 405 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 HHEXQ03014 270 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 PPFIA1Q13136 1202 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 IQCB1Q15051 598 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 FCRL6Q6DN72 434 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 MMS22LQ6ZRQ5 1243 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 HTR3DQ70Z44 454 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 CIR1Q86X95 450 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-209ENST00000467124 CCDC28AQ8IWP9 274 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 FUKQ8N0W3 1084 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 TMEM171Q8WVE6 324 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 MIEF2Q96C03 454 aa4.83□□□□□ -1.64
VPS13A-209ENST00000467124 TEPSINQ96N21 525 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms