RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 LOXL3P58215 753 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 NKX6-1P78426 367 aaPredicted RBP3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 SP2Q02086 613 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 PLAC9Q5JTB6 97 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 ZNF626Q68DY1 528 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 CEP85Q6P2H3 762 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 ANKRD16Q6P6B7 361 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 CATIPQ7Z7H3 387 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 SMAD5Q99717 465 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 GTPBP4Q9BZE4 634 aaKnown RBP3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 ARHGEF3Q9NR81 526 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 DLL3Q9NYJ7 618 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 SH2B3Q9UQQ2 575 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 SSX2IPQ9Y2D8 614 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 RAD54BQ9Y620 910 aa3.91□□□□□ -1.78
GTF3C3-209ENST00000466862 ADAMTS3O15072 1205 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 ERC2O15083 957 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 IGSF3O75054 1194 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 IL6RP08887 468 aaPredicted RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 POU2F2P09086 479 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 PRR35P0CG20 571 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 SMARCA1P28370 1054 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 RECQLP46063 649 aaPredicted RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 EXOSC9Q06265 439 aaKnown RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 MAPK7Q13164 816 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 TMEM119Q4V9L6 283 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 SLC44A4Q53GD3 710 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 MTX3Q5HYI7 312 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 AARS2Q5JTZ9 985 aaKnown RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 THEMIS2Q5TEJ8 643 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 FAM160B1Q5W0V3 765 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 TMEM108Q6UXF1 575 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 CELF5Q8N6W0 485 aaKnown RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 FAM46DQ8NEK8 389 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 DDX17Q92841 729 aaKnown RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 TNPO1Q92973 898 aaKnown RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 FAM167AQ96KS9 214 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 SLC46A1Q96NT5 459 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 FSD1LQ9BXM9 530 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 LMBRD1Q9NUN5 540 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 BTBD3Q9Y2F9 522 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 SPEF1Q9Y4P9 236 aa3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 FNDC1Q4ZHG4 1894 aaPredicted RBP3.9□□□□□ -1.79
GTF3C3-209ENST00000466862 SLC16A3O15427 465 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 JTBO76095 146 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 TJP3O95049 919 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 GNAI2P04899 355 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 PLS1Q14651 629 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 SRSF7Q16629 238 aaKnown RBP eCLIP3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 MORN5Q5VZ52 161 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 CPA6Q8N4T0 437 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 ATG4AQ8WYN0 398 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 ZNF48Q96MX3 618 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 DUSP22Q9NRW4 184 aa3.89□□□□□ -1.79
GTF3C3-209ENST00000466862 PROB1E7EW31 1015 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 TLR5O60602 858 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 CYP4F2P78329 520 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 GRM1Q13255 1194 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 PGS1Q32NB8 556 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 SUPT20HL1Q3ZLR7 823 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 ICE2Q659A1 982 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 SFRP4Q6FHJ7 346 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 SLC29A4Q7RTT9 530 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 ZNF804AQ7Z570 1209 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 WDR53Q7Z5U6 358 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 ZNF366Q8N895 744 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 ZC3H10Q96K80 434 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 NELL2Q99435 816 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 MACROD1Q9BQ69 325 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 TTYH3Q9C0H2 523 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 TCF7L1Q9HCS4 588 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 SH3BP4Q9P0V3 963 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 SERTAD3Q9UJW9 196 aa3.88□□□□□ -1.79
GTF3C3-209ENST00000466862 KCNAB3O43448 404 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 UNC5CO95185 931 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 TOP3BO95985 862 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 CSF1RP07333 972 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 ATXN1LP0C7T5 689 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 NDUFB7P17568 137 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 HDCP19113 662 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 KELP23276 732 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 CERS1P27544 350 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 VIPR2P41587 438 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 SOX8P57073 446 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 EEFSECP57772 596 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 LILRA4P59901 499 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 TUBA4AP68366 448 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 ETFDHQ16134 617 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 LONRF3Q496Y0 759 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 CEP78Q5JTW2 689 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 TREML2Q5T2D2 321 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 PRAMEF17Q5VTA0 474 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 PLBD2Q8NHP8 589 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 BRIX1Q8TDN6 353 aaKnown RBP3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 MVB12AQ96EY5 273 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 SLC35A4Q96G79 324 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 THAP7Q9BT49 309 aaPredicted RBP3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 SLC12A5Q9H2X9 1139 aa3.87□□□□□ -1.79
GTF3C3-209ENST00000466862 PCDH12Q9NPG4 1184 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms