RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SEMA4GQ9NTN9 838 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 PIH1D1Q9NWS0 290 aaKnown RBP4.92□□□□□ -1.62
VPS13D-203ENST00000466732 G3BP2Q9UN86 482 aaKnown RBP4.92□□□□□ -1.62
VPS13D-203ENST00000466732 SPATA31A6Q5VVP1 1343 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 IGLV2-14P01704 120 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 ATXN1LP0C7T5 689 aaKnown RBP4.91□□□□□ -1.62
VPS13D-203ENST00000466732 NPR1P16066 1061 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 ELLP55199 621 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-203ENST00000466732 IQCB1Q15051 598 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 MINDY4Q4G0A6 757 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 NXNQ6DKJ4 435 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 DPY19L2P1Q6NXN4 242 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 GRASPQ7Z6J2 395 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-203ENST00000466732 ARHGEF25Q86VW2 580 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS13D-203ENST00000466732 MAGEB6Q8N7X4 407 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 FKBP10Q96AY3 582 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 PBKQ96KB5 322 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 NELL2Q99435 816 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 ALG8Q9BVK2 526 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 B3GNT5Q9BYG0 378 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 ZMAT3Q9HA38 289 aaKnown RBP4.91□□□□□ -1.62
VPS13D-203ENST00000466732 SERHLQ9NQF3 203 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 XPR1Q9UBH6 696 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 TCEAL9Q9UHQ7 104 aa4.91□□□□□ -1.62
VPS13D-203ENST00000466732 COL11A2P13942 1736 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-203ENST00000466732 A0A1W2PPL8 197 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 LINC00473A8K010 186 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 PPM1DO15297 605 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 C1QL1O75973 258 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 THP07101 528 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 NR2F6P10588 404 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 KITP10721 976 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 VIPR2P41587 438 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 UCP3P55916 312 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 LOXL3P58215 753 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 LILRA4P59901 499 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 GPSM2P81274 684 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 MLC1Q15049 377 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 AKNAD1Q5T1N1 836 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 SFRP4Q6FHJ7 346 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-203ENST00000466732 LAYNQ6UX15 382 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 NTN5Q8WTR8 489 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-203ENST00000466732 RFKQ969G6 155 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 ZNF764Q96H86 408 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-203ENST00000466732 UROC1Q96N76 676 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 MOGAT1Q96PD6 335 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 TIMP4Q99727 224 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 TRIM54Q9BYV2 358 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 TMEM60Q9H2L4 133 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 ATP6V0A4Q9HBG4 840 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 ASB6Q9NWX5 421 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 EHD3Q9NZN3 535 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 PTGFRNQ9P2B2 879 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 DKK3Q9UBP4 350 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 TMX2Q9Y320 296 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 ENTPD2Q9Y5L3 495 aa4.9□□□□□ -1.63
VPS13D-203ENST00000466732 PHGDHO43175 533 aaKnown RBP4.89□□□□□ -1.63
VPS13D-203ENST00000466732 TSPAN6O43657 245 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 URI1O94763 535 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-203ENST00000466732 PDHA1P08559 390 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 PXNP49023 591 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-203ENST00000466732 SLC11A2P49281 568 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 ARFIP2P53365 341 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 TBCCQ15814 346 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 TSTD2Q5T7W7 516 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 ICE2Q659A1 982 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 SWSAP1Q6NVH7 229 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 MAEAQ7L5Y9 396 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 KIAA0319LQ8IZA0 1049 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 KBTBD7Q8WVZ9 684 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 NELL1Q92832 810 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 PTDSS2Q9BVG9 487 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 C1orf112Q9NSG2 853 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-203ENST00000466732 ST3GAL5Q9UNP4 418 aa4.89□□□□□ -1.63
VPS13D-203ENST00000466732 CAPN8A6NHC0 703 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 LRRC3CA6NJW4 275 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 FAM227AF5H4B4 570 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 BTN3A1O00481 513 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 ERC2O15083 957 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 TTLL1O95922 423 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 ZFXP17010 805 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-203ENST00000466732 FBLP22087 321 aaKnown RBP4.88□□□□□ -1.63
VPS13D-203ENST00000466732 EIF2B5Q13144 721 aaKnown RBP4.88□□□□□ -1.63
VPS13D-203ENST00000466732 BMPR2Q13873 1038 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 ARHGAP29Q52LW3 1261 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 ARHGAP40Q5TG30 622 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 ZNF783Q6ZMS7 281 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 DTX2Q86UW9 622 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 DNAJC5GQ8N7S2 189 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 IL31RAQ8NI17 732 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 CPNE5Q9HCH3 593 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 ARPP21Q9UBL0 812 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-203ENST00000466732 SERTAD3Q9UJW9 196 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 SHOC2Q9UQ13 582 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 SSX2IPQ9Y2D8 614 aa4.88□□□□□ -1.63
VPS13D-203ENST00000466732 POLR2AP24928 1970 aaKnown RBP4.87□□□□□ -1.63
VPS13D-203ENST00000466732 A0A087WWL8 130 aa4.87□□□□□ -1.63
VPS13D-203ENST00000466732 A6NNZ2 444 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms