RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 FIGNQ5HY92 759 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 IQCEQ6IPM2 695 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 ELMSAN1Q6PJG2 1045 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 C4orf50Q6ZRC1 276 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 LRRTM3Q86VH5 581 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 PALB2Q86YC2 1186 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 MYCBPAPQ8TBZ2 947 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 CASP10Q92851 521 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 IQCDQ96DY2 449 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 TMEM176AQ96HP8 235 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 FUBP3Q96I24 572 aaKnown RBP eCLIP17.04■□□□□ 0.32
GPC1-207ENST00000466624 PCMTD1Q96MG8 357 aaPredicted RBP17.04■□□□□ 0.32
GPC1-207ENST00000466624 TWNKQ96RR1 684 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 ELOVL4Q9GZR5 314 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 DPEP3Q9H4B8 488 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 ABCB6Q9NP58 842 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 CRTAC1Q9NQ79 661 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
GPC1-207ENST00000466624 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 FHOD1Q9Y613 1164 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 MYBPHLA2RUH7 354 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 PAEPP09466 180 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 ZNF132P52740 706 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 RAD23BP54727 409 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 PSMC1P62191 440 aaKnown RBP17.03■□□□□ 0.32
GPC1-207ENST00000466624 ADAM15Q13444 863 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 CTC1Q2NKJ3 1217 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 CFAP221Q4G0U5 840 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 TMEM270Q6UE05 265 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 TCEAL8Q8IYN2 117 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 STK33Q9BYT3 514 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 TMLHEQ9NVH6 421 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 DZANK1Q9NVP4 752 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 CEP72Q9P209 647 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 AJAP1Q9UKB5 411 aaPredicted RBP17.03■□□□□ 0.32
GPC1-207ENST00000466624 GTF3C4Q9UKN8 822 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 KIAA1257Q9ULG3 409 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 PCDHB5Q9Y5E4 795 aa17.03■□□□□ 0.32
GPC1-207ENST00000466624 EPHB6O15197 1021 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 ATP2C2O75185 946 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 PAPLNO95428 1278 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 VNN2O95498 520 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 EPCAMP16422 314 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 ELF1P32519 619 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
GPC1-207ENST00000466624 POLR2FP61218 127 aaKnown RBP17.02■□□□□ 0.32
GPC1-207ENST00000466624 ARHGAP44Q17R89 818 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 MDH1BQ5I0G3 518 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 CCDC149Q6ZUS6 474 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 ACOT1Q86TX2 421 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 RBBP8NLQ8NC74 664 aaPredicted RBP17.02■□□□□ 0.32
GPC1-207ENST00000466624 KREMEN2Q8NCW0 462 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 MYLPFQ96A32 169 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 PABPC5Q96DU9 382 aaKnown RBP17.02■□□□□ 0.32
GPC1-207ENST00000466624 PCED1BQ96HM7 432 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 NUP58Q9BVL2 599 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 EDEM3Q9BZQ6 932 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 GPR88Q9GZN0 384 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 IGFLR1Q9H665 355 aa17.02■□□□□ 0.32
GPC1-207ENST00000466624 MYH10P35580 1976 aa17.02■□□□□ 0.31
GPC1-207ENST00000466624 ATP8B3O60423 1300 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 GLP2RO95838 553 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 HOXA9P31269 272 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 MAGEA11P43364 429 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 JAM2P57087 298 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 ADCY1Q08828 1119 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 RAPGEF1Q13905 1077 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 DRAP1Q14919 205 aaPredicted RBP17.01■□□□□ 0.31
GPC1-207ENST00000466624 ZNF394Q53GI3 561 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 SPATA2LQ8IUW3 424 aaPredicted RBP17.01■□□□□ 0.31
GPC1-207ENST00000466624 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 VN1R2Q8NFZ6 395 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 TRIM5Q9C035 493 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 TTYH3Q9C0H2 523 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 MAN1C1Q9NR34 630 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 MYO6Q9UM54 1294 aa17.01■□□□□ 0.31
GPC1-207ENST00000466624 PATJQ8NI35 1801 aa17■□□□□ 0.31
GPC1-207ENST00000466624 F8VZ95 297 aa17■□□□□ 0.31
GPC1-207ENST00000466624 RNF225M0QZC1 329 aaPredicted RBP17■□□□□ 0.31
GPC1-207ENST00000466624 AP5Z1O43299 807 aa17■□□□□ 0.31
GPC1-207ENST00000466624 ZMYND10O75800 440 aa17■□□□□ 0.31
GPC1-207ENST00000466624 POU2F2P09086 479 aa17■□□□□ 0.31
GPC1-207ENST00000466624 VDRP11473 427 aa17■□□□□ 0.31
GPC1-207ENST00000466624 KRT5P13647 590 aa17■□□□□ 0.31
GPC1-207ENST00000466624 TUFMP49411 452 aaKnown RBP17■□□□□ 0.31
GPC1-207ENST00000466624 PLCB2Q00722 1185 aa17■□□□□ 0.31
GPC1-207ENST00000466624 ORC1Q13415 861 aa17■□□□□ 0.31
GPC1-207ENST00000466624 STILQ15468 1287 aa17■□□□□ 0.31
GPC1-207ENST00000466624 LIN9Q5TKA1 542 aa17■□□□□ 0.31
GPC1-207ENST00000466624 ARHGAP17Q68EM7 881 aa17■□□□□ 0.31
GPC1-207ENST00000466624 VSTM1Q6UX27 236 aa17■□□□□ 0.31
GPC1-207ENST00000466624 FMNL3Q8IVF7 1028 aa17■□□□□ 0.31
GPC1-207ENST00000466624 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
GPC1-207ENST00000466624 ATAD1Q8NBU5 361 aa17■□□□□ 0.31
GPC1-207ENST00000466624 CEP295NLQ96MC4 621 aa17■□□□□ 0.31
GPC1-207ENST00000466624 HEXIM2Q96MH2 286 aaKnown RBP17■□□□□ 0.31
GPC1-207ENST00000466624 PGLYRP2Q96PD5 576 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms