RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CELF5Q8N6W0 485 aaKnown RBP18.81■□□□□ 0.6
COL7A1-206ENST00000466591 MAB21L3Q8N8X9 362 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 RDH13Q8NBN7 331 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 SNX21Q969T3 373 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 HPDLQ96IR7 371 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 ZFYVE19Q96K21 471 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 ACBD6Q9BR61 282 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 TRPC7Q9HCX4 862 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 OBP2AQ9NY56 170 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 L1RE1Q9UN81 338 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 SCN1AP35498 2009 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 EIF3DO15371 548 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL7A1-206ENST00000466591 DDX6P26196 483 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL7A1-206ENST00000466591 WNT7BP56706 349 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 FCHO2Q0JRZ9 810 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 INTS6LQ5JSJ4 861 aaKnown RBP18.8■□□□□ 0.6
COL7A1-206ENST00000466591 C4orf50Q6ZRC1 276 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 RALGPS2Q86X27 583 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-206ENST00000466591 CBWD2Q8IUF1 395 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 MAML2Q8IZL2 1156 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-206ENST00000466591 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 FSIP1Q8NA03 581 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 FAM126AQ9BYI3 521 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-206ENST00000466591 SMG9Q9H0W8 520 aaKnown RBP18.8■□□□□ 0.6
COL7A1-206ENST00000466591 CHRDQ9H2X0 955 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 INTS13Q9NVM9 706 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 KBTBD4Q9NVX7 518 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 GTF3C4Q9UKN8 822 aa18.8■□□□□ 0.6
COL7A1-206ENST00000466591 USP34Q70CQ2 3546 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 SPECC1L-ADORA2AF8WAN1 911 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 F13A1P00488 732 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 ANXA13P27216 316 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 AFMP43652 599 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 SOX9P48436 509 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 TRPC3Q13507 836 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 DDR2Q16832 855 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 SDHAF4Q5VUM1 108 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 WDR49Q8IV35 697 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 CMTM8Q8IZV2 173 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 SPATA18Q8TC71 538 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 EXOC4Q96A65 974 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 CCDC127Q96BQ5 260 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 RSPRY1Q96DX4 576 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 FAM84AQ96KN4 292 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 BLZF1Q9H2G9 400 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 ABCB6Q9NP58 842 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 GDAP2Q9NXN4 497 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 GTSE1Q9NYZ3 720 aa18.79■□□□□ 0.6
COL7A1-206ENST00000466591 UBE4BO95155 1302 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 PHACTR2O75167 634 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 PRAMEF12O95522 483 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 CYP2F1P24903 491 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 CXCL12P48061 93 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 GPR15P49685 360 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 MLLT6P55198 1093 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-206ENST00000466591 NLRP12P59046 1061 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 TNNC1P63316 161 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 AMPD2Q01433 879 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 CYP27A1Q02318 531 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 MAPRE1Q15691 268 aaKnown RBP18.78■□□□□ 0.6
COL7A1-206ENST00000466591 E2F4Q16254 413 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 SNRNP35Q16560 246 aaKnown RBP18.78■□□□□ 0.6
COL7A1-206ENST00000466591 ITPRIPL2Q3MIP1 535 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 DGKKQ5KSL6 1271 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 SHC4Q6S5L8 630 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 UNC13DQ70J99 1090 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 GLIS3Q8NEA6 775 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 LEO1Q8WVC0 666 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-206ENST00000466591 SNX25Q9H3E2 840 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 KIF9Q9HAQ2 790 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 TMLHEQ9NVH6 421 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 MAGEC2Q9UBF1 373 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-206ENST00000466591 GMEB2Q9UKD1 530 aa18.78■□□□□ 0.6
COL7A1-206ENST00000466591 SMG5Q9UPR3 1016 aaKnown RBP18.78■□□□□ 0.6
COL7A1-206ENST00000466591 NCANO14594 1321 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 CLIC2O15247 247 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 CKMP06732 381 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 CTHP32929 405 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 GRIK1P39086 918 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 PON2Q15165 354 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 ATL3Q6DD88 541 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 PRR23BQ6ZRT6 265 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 XXYLT1Q8NBI6 393 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 STKLD1Q8NE28 680 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 C7orf25Q9BPX7 421 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 SYT15Q9BQS2 421 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 SLC46A2Q9BY10 475 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 PRMT8Q9NR22 394 aaPredicted RBP18.77■□□□□ 0.6
COL7A1-206ENST00000466591 AGPAT3Q9NRZ7 376 aa18.77■□□□□ 0.6
COL7A1-206ENST00000466591 PATJQ8NI35 1801 aa18.77■□□□□ 0.59
COL7A1-206ENST00000466591 TRAV19A0A0A6YYK7 116 aa18.76■□□□□ 0.59
COL7A1-206ENST00000466591 EXOC3O60645 756 aa18.76■□□□□ 0.59
COL7A1-206ENST00000466591 PSMC1P62191 440 aaKnown RBP18.76■□□□□ 0.59
COL7A1-206ENST00000466591 SNRPFP62306 86 aaKnown RBP18.76■□□□□ 0.59
COL7A1-206ENST00000466591 TNK2Q07912 1038 aa18.76■□□□□ 0.59
COL7A1-206ENST00000466591 TXNDC8Q6A555 127 aa18.76■□□□□ 0.59
COL7A1-206ENST00000466591 OR5B17Q8NGF7 314 aa18.76■□□□□ 0.59
COL7A1-206ENST00000466591 ZNF507Q8TCN5 953 aa18.76■□□□□ 0.59
COL7A1-206ENST00000466591 FUBP3Q96I24 572 aaKnown RBP eCLIP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms