RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 KIF2BQ8N4N8 673 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 C3orf20Q8ND61 904 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 ACTL9Q8TC94 416 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 RSAD2Q8WXG1 361 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 DCPSQ96C86 337 aaKnown RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 CYTH4Q9UIA0 394 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 STK38LQ9Y2H1 464 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 UBOX5O94941 541 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 KLRC2P26717 231 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 MXD4Q14582 209 aaPredicted RBP17.22■□□□□ 0.35
SLX4-202ENST00000466154 SCYL2Q6P3W7 929 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 CYB5D1Q6P9G0 228 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 MPZL3Q6UWV2 235 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 CPXM1Q96SM3 734 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 TMEM109Q9BVC6 243 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 RNPEPQ9H4A4 650 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 CPSF3Q9UKF6 684 aaKnown RBP17.22■□□□□ 0.35
SLX4-202ENST00000466154 TPX2Q9ULW0 747 aaKnown RBP17.22■□□□□ 0.35
SLX4-202ENST00000466154 DNAH12Q6ZR08 3092 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 HOXC6P09630 235 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 IL1R2P27930 398 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
SLX4-202ENST00000466154 EFTUD2Q15029 972 aaKnown RBP eCLIP17.22■□□□□ 0.35
SLX4-202ENST00000466154 PLCB4Q15147 1175 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 PKN2Q16513 984 aaKnown RBP17.22■□□□□ 0.35
SLX4-202ENST00000466154 BBS9Q3SYG4 887 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
SLX4-202ENST00000466154 GPATCH11Q8N954 259 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
SLX4-202ENST00000466154 ATXN2Q99700 1313 aaKnown RBP17.21■□□□□ 0.35
SLX4-202ENST00000466154 IGKV6D-21A0A0A0MT36 114 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 DNALI1O14645 258 aaPredicted RBP17.21■□□□□ 0.35
SLX4-202ENST00000466154 ASPAP45381 313 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 RGS7P49802 495 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 LMNB2Q03252 620 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 DNAJC3Q13217 504 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 CFAP57Q96MR6 1250 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 hCG_1818297A0A087WSY0 165 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 ASAP2O43150 1006 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 SNX3O60493 162 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 SSTR1P30872 391 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 SH3PXD2AQ5TCZ1 1133 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 FUKQ8N0W3 1084 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 CCDC33Q8N5R6 958 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 FAM71DQ8N9W8 422 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 CCDC63Q8NA47 563 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 USP15Q9Y4E8 981 aaPredicted RBP17.21■□□□□ 0.35
SLX4-202ENST00000466154 WDR81Q562E7 1941 aa17.21■□□□□ 0.35
SLX4-202ENST00000466154 A0A087WZ62 844 aa17.21■□□□□ 0.34
SLX4-202ENST00000466154 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.34
SLX4-202ENST00000466154 ATP11AP98196 1134 aa17.21■□□□□ 0.34
SLX4-202ENST00000466154 PIGHQ14442 188 aaPredicted RBP17.21■□□□□ 0.34
SLX4-202ENST00000466154 RAB6CQ53S08 254 aa17.21■□□□□ 0.34
SLX4-202ENST00000466154 FAM102AQ5T9C2 384 aaPredicted RBP17.21■□□□□ 0.34
SLX4-202ENST00000466154 JADE1Q6IE81 842 aa17.21■□□□□ 0.34
SLX4-202ENST00000466154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.21■□□□□ 0.34
SLX4-202ENST00000466154 ZCCHC9Q8N567 271 aaKnown RBP17.21■□□□□ 0.34
SLX4-202ENST00000466154 MMP19Q99542 508 aa17.21■□□□□ 0.34
SLX4-202ENST00000466154 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.34
SLX4-202ENST00000466154 RAB6CQ9H0N0 254 aa17.21■□□□□ 0.34
SLX4-202ENST00000466154 C12orf65Q9H3J6 166 aaKnown RBP17.21■□□□□ 0.34
SLX4-202ENST00000466154 ALG13Q9NP73 1137 aaKnown RBP17.21■□□□□ 0.34
SLX4-202ENST00000466154 GGA2Q9UJY4 613 aa17.21■□□□□ 0.34
SLX4-202ENST00000466154 LACTBL1A8MY62 500 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 SUN1O94901 812 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 CA4P22748 312 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 POLR2BP30876 1174 aaKnown RBP17.2■□□□□ 0.34
SLX4-202ENST00000466154 ZNF132P52740 706 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 TMEM62Q0P6H9 643 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 MMRN1Q13201 1228 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 ANKRD22Q5VYY1 191 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 NPNTQ6UXI9 565 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 PIGWQ7Z7B1 504 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 KIAA0319LQ8IZA0 1049 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 ALLCQ8N6M5 410 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 FAM167AQ96KS9 214 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 CDT1Q9H211 546 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 PNMA3Q9UL41 463 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 GPR25O00155 361 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 FAM189A1O60320 539 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 CDKN2BP42772 138 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
SLX4-202ENST00000466154 STAT4Q14765 748 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
SLX4-202ENST00000466154 PARP9Q8IXQ6 854 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 PITPNM3Q9BZ71 974 aa17.2■□□□□ 0.34
SLX4-202ENST00000466154 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.2■□□□□ 0.34
SLX4-202ENST00000466154 DOCK1Q14185 1865 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 LRCH4O75427 683 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 ZNF286BP0CG31 522 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 SEPT7Q16181 437 aaKnown RBP17.19■□□□□ 0.34
SLX4-202ENST00000466154 HADHQ16836 314 aaKnown RBP17.19■□□□□ 0.34
SLX4-202ENST00000466154 SPATA21Q7Z572 469 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 SDCBP2Q9H190 292 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 TRIM33Q9UPN9 1127 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 AGAP1Q9UPQ3 857 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 A0A1W2PPM1 405 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms