RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CIAPIN1Q6FI81 312 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 AMIGO3Q86WK7 504 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 PPIL6Q8IXY8 311 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 DCAKDQ8WVC6 231 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 SPATA16Q9BXB7 569 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 USTQ9Y2C2 406 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 DENND3A2RUS2 1198 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 LPXNO60711 386 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 ANPEPP15144 967 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 ATF7P17544 494 aaPredicted RBP20.72■□□□□ 0.91
SDF4-205ENST00000465727 HOXA10P31260 410 aaPredicted RBP20.72■□□□□ 0.91
SDF4-205ENST00000465727 ETV4P43268 484 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 PEX3P56589 373 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 C1QBPQ07021 282 aaKnown RBP20.72■□□□□ 0.91
SDF4-205ENST00000465727 CYP24A1Q07973 514 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 TRAPPC3LQ5T215 181 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 RASIP1Q5U651 963 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 LLGL2Q6P1M3 1020 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 PHLDB2Q86SQ0 1253 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.72■□□□□ 0.911e-7■□□□□ 10.5
SDF4-205ENST00000465727 ITFG2Q969R8 447 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 FAM161BQ96MY7 647 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 MXRA8Q9BRK3 442 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 C11orf70Q9BRQ4 267 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 GPAMQ9HCL2 828 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 PARVAQ9NVD7 372 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 TBX20Q9UMR3 447 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 WASF2Q9Y6W5 498 aa20.72■□□□□ 0.91
SDF4-205ENST00000465727 E7ESA3 106 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 ATP5BP06576 529 aaKnown RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 KRT10P13645 584 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 ETS1P14921 441 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 CDK7P50613 346 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 NOMO3P69849 1222 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 DNAL1Q4LDG9 190 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 LRRC23Q53EV4 343 aaPredicted RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 KAZNQ674X7 775 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 C3orf62Q6ZUJ4 267 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 ANKMY2Q8IV38 441 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 FAM81AQ8TBF8 368 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 FEZF2Q8TBJ5 459 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 PPP2R3CQ969Q6 453 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 APOPT1Q96IL0 206 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 ECSITQ9BQ95 431 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 TOPORSQ9NS56 1045 aaPredicted RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 NDE1Q9NXR1 346 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 KCNK4Q9NYG8 393 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 CCNL1Q9UK58 526 aaPredicted RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 SNCAIPQ9Y6H5 919 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 COMMD3-BMI1R4GMX3 469 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 IQANK1A0A1B0GTG1 560 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 DDTLA6NHG4 134 aaPredicted RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 MT-ND3P03897 115 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 KRT1P04264 644 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 QARSP47897 775 aaKnown RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 NEK3P51956 506 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 UBXN2AP68543 259 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 TBCCQ15814 346 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 CNPY1Q3B7I2 92 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 IZUMO2Q6UXV1 221 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 SPOCD1Q6ZMY3 1216 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 MYLK4Q86YV6 388 aaPredicted RBP20.71■□□□□ 0.91
SDF4-205ENST00000465727 SCUBE1Q8IWY4 988 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 ZDHHC15Q96MV8 337 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 FNBP1Q96RU3 617 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 HAPLN3Q96S86 360 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 IDI2Q9BXS1 227 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 ARHGEF4Q9NR80 690 aa20.71■□□□□ 0.91
SDF4-205ENST00000465727 SGK1O00141 431 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 NPM3O75607 178 aaKnown RBP20.7■□□□□ 0.9
SDF4-205ENST00000465727 TM7SF2O76062 418 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 UBTFL6P0CB48 400 aaPredicted RBP20.7■□□□□ 0.9
SDF4-205ENST00000465727 MYL2P10916 166 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 AMPD1P23109 780 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 SSTR1P30872 391 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 DSG3P32926 999 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 ACTR3P61158 418 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 EFTUD2Q15029 972 aaKnown RBP eCLIP20.7■□□□□ 0.92e-6■■■□□ 18.7
SDF4-205ENST00000465727 LIN52Q52LA3 116 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 C2CD6Q53TS8 623 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 MFSD7Q6UXD7 560 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 PRR11Q96HE9 360 aaPredicted RBP20.7■□□□□ 0.9
SDF4-205ENST00000465727 FRMD8P1Q9BZ68 369 aaPredicted RBP20.7■□□□□ 0.9
SDF4-205ENST00000465727 TBC1D30Q9Y2I9 924 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 BTAF1O14981 1849 aa20.7■□□□□ 0.9
SDF4-205ENST00000465727 CAPN14A8MX76 684 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 B2RBV5 119 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 CRKP46108 304 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 SLC18A2Q05940 514 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 CDK18Q07002 472 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 TFDP3Q5H9I0 405 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 ZFYVE27Q5T4F4 411 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 ADGRG6Q86SQ4 1221 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 TRIM42Q8IWZ5 723 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 ABRAQ8N0Z2 381 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 TMEM161BQ8NDZ6 487 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 STKLD1Q8NE28 680 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 OPTNQ96CV9 577 aa20.69■□□□□ 0.9
SDF4-205ENST00000465727 ADAM33Q9BZ11 813 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms