RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 NOC2LQ9Y3T9 749 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 FARP1Q9Y4F1 1045 aaPredicted RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 ASB3Q9Y575 518 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDHB4Q9Y5E5 795 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDHB2Q9Y5E7 798 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDHB12Q9Y5F1 795 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDHGA1Q9Y5H4 931 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 NR2E3Q9Y5X4 410 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PARP3Q9Y6F1 533 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 SNCAIPQ9Y6H5 919 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 DGKBQ9Y6T7 804 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 RTEL1-TNFRSF6BF6WH68 1400 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 PPIP5K1Q6PFW1 1433 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 THOC2Q8NI27 1593 aaKnown RBP0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TMEM94Q12767 1356 aa0.95□□□□□ -2.26
RPL39P28-201ENST00000465655 TOP2AP11388 1531 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ZNF608Q9ULD9 1512 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 GRIN2DO15399 1336 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ATP8B3O60423 1300 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 FLT1P17948 1338 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 MAP3K19Q56UN5 1328 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TTC21AQ8NDW8 1320 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDH11XQ9BZA7 1347 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PCDH11YQ9BZA8 1340 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC88BA6NC98 1476 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NCOA2Q15596 1464 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CEP164Q9UPV0 1460 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 A0A0G2JS52 829 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PNMA6FA0A0J9YX94 578 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NPHP3-ACAD11A0A0J9YXS1 232 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 FAM237AA0A1B0GTK4 181 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 A0A1W2PQ72 361 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 KANSL1LA0AUZ9 987 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 HEATR9A2RTY3 570 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 FUOMA2VDF0 154 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 OR6C74A6NCV1 312 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CAPN8A6NHC0 703 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SPDYE2BA6NHP3 402 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 RRN3P2A6NIE6 340 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 LRRC53A6NM62 1247 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TRPC5OSA6NMA1 111 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SRRM3A6NNA2 597 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 A6NNZ2 444 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 RHPN2P1A8MT19 583 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ZBBXA8MT70 800 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 C12orf71A8MTZ7 269 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 A8MU76 341 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 A8MUA0 341 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 FADS2P1A8MWK0 482 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 DCDC2CA8MYV0 355 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ERVV-2B6SEH9 535 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 KCNJ18B7U540 433 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NT5C1B-RDH14C9J2C7 533 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 KBTBD13C9JR72 458 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 H0Y858 1186 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 H3BQV1 296 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 H3BRB1 525 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 H7C1Q1 480 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 LINC01387J3KSC0 135 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 EYA2O00167 538 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 RNF103O00237 685 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PGRMC1O00264 195 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PLOD2O00469 737 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 BTN3A1O00481 513 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PITPNM1O00562 1244 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NOP56O00567 594 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TXNDC9O14530 226 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 AP3D1O14617 1153 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 IRS4O14654 1257 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TSPAN4O14817 238 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 FSCN2O14926 492 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 POLR1CO15160 346 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 LDLRAD4O15165 306 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PMM2O15305 246 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TM9SF1O15321 606 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 KCNN4O15554 427 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 RRP8O43159 456 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 AP5Z1O43299 807 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ADCY6O43306 1168 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ATMINO43313 823 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PROM1O43490 865 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 TRAPPC3O43617 180 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 MAN1A2O60476 641 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 GREM1O60565 184 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PLOD3O60568 738 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CTNND1O60716 968 aaKnown RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC22O60826 627 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 SHOX2O60902 331 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 LILRB5O75023 590 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NOS1APO75052 506 aaPredicted RBP0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 DNAJB6O75190 326 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PEX11AO75192 247 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NDUFS2O75306 463 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 USP12O75317 370 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 ULK1O75385 1050 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 NR1I2O75469 434 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 GPC4O75487 556 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 PRDM1O75626 825 aa0.94□□□□□ -2.26
RPL39P28-201ENST00000465655 CRTAPO75718 401 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms