RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PCDHB5Q9Y5E4 795 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 PTPRDP23468 1912 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 N4BP1O75113 896 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 AFPP02771 609 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 PTPN1P18031 435 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 MTIF2P46199 727 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 ZP2Q05996 745 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 SMARCB1Q12824 385 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 LRMPQ12912 555 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 NFE2Q16621 373 aaPredicted RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 MGAT5BQ3V5L5 792 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 ADHFE1Q8IWW8 467 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 SPPL2BQ8TCT7 592 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 C2orf15Q8WU43 125 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 SEPT5Q99719 369 aaPredicted RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 BCO2Q9BYV7 579 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 DNAJC25Q9H1X3 360 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 CYP3A43Q9HB55 503 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 WDR6Q9NNW5 1121 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 SAMSN1Q9NSI8 373 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 DNMT3BQ9UBC3 853 aaKnown RBP13.22□□□□□ -0.29
CHPF2-202ENST00000465601 PRKAG3Q9UGI9 489 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
CHPF2-202ENST00000465601 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 PMM2O15305 246 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 POU2F2P09086 479 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 HAPLN1P10915 354 aaPredicted RBP13.21□□□□□ -0.29
CHPF2-202ENST00000465601 PTPN2P17706 415 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 CD58P19256 250 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 CYP2F1P24903 491 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.29
CHPF2-202ENST00000465601 NDST1P52848 882 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 CETN1Q12798 172 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 ORC1Q13415 861 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 MDH1BQ5I0G3 518 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.29
CHPF2-202ENST00000465601 FAM114A1Q8IWE2 563 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 MYLPFQ96A32 169 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 ZNF512Q96ME7 567 aaPredicted RBP13.21□□□□□ -0.29
CHPF2-202ENST00000465601 COL25A1Q9BXS0 654 aaPredicted RBP13.21□□□□□ -0.29
CHPF2-202ENST00000465601 CD320Q9NPF0 282 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 CEP72Q9P209 647 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 MAGEC2Q9UBF1 373 aaPredicted RBP13.21□□□□□ -0.29
CHPF2-202ENST00000465601 HMGXB4Q9UGU5 601 aa13.21□□□□□ -0.29
CHPF2-202ENST00000465601 TRIOO75962 3097 aa13.21□□□□□ -0.3
CHPF2-202ENST00000465601 CLUHO75153 1309 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 C19orf67A6NJJ6 358 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 P4HA2O15460 535 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 LETM1O95202 739 aaPredicted RBP13.2□□□□□ -0.3
CHPF2-202ENST00000465601 RHOP08100 348 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 FSHRP23945 695 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
CHPF2-202ENST00000465601 GPR15P49685 360 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 EPHB3P54753 998 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 CYP27A1Q02318 531 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 PLD1Q13393 1074 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
CHPF2-202ENST00000465601 SKOR2Q2VWA4 1001 aaPredicted RBP13.2□□□□□ -0.3
CHPF2-202ENST00000465601 ANO6Q4KMQ2 910 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 SDHAF4Q5VUM1 108 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 C4orf50Q6ZRC1 276 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 HS6ST3Q8IZP7 471 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 ELMOD1Q8N336 334 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 B3GALNT2Q8NCR0 500 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 EHBP1Q8NDI1 1231 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 LMO3Q8TAP4 145 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 MYCBPAPQ8TBZ2 947 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 GPR152Q8TDT2 470 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 GIPC2Q8TF65 315 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 ARID3AQ99856 593 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 CORO1BQ9BR76 489 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
CHPF2-202ENST00000465601 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
CHPF2-202ENST00000465601 GREB1Q4ZG55 1949 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 SYCE3A1L190 88 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 KCNJ18B7U540 433 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 C2CD4DB7Z1M9 353 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 LOC730098B7Z3J9 87 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 CLDN5O00501 218 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
CHPF2-202ENST00000465601 ATF6P18850 670 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 BDNFP23560 247 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 INCA1Q0VD86 236 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 MAN2A1Q16706 1144 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 DDR2Q16832 855 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 PABPC1LQ4VXU2 614 aaKnown RBP13.19□□□□□ -0.3
CHPF2-202ENST00000465601 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
CHPF2-202ENST00000465601 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
CHPF2-202ENST00000465601 UNC93AQ86WB7 457 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 GJD3Q8N144 294 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 ITFG1Q8TB96 612 aa13.19□□□□□ -0.3
CHPF2-202ENST00000465601 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms