RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 NECTIN4Q96NY8 510 aa18.08■□□□□ 0.48
USP39-211ENST00000465282 TMEM209Q96SK2 561 aa18.08■□□□□ 0.48
USP39-211ENST00000465282 PKMYT1Q99640 499 aa18.08■□□□□ 0.48
USP39-211ENST00000465282 PRKD2Q9BZL6 878 aa18.08■□□□□ 0.48
USP39-211ENST00000465282 SDCBP2Q9H190 292 aa18.08■□□□□ 0.48
USP39-211ENST00000465282 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.48
USP39-211ENST00000465282 XYLBO75191 536 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 CILPO75339 1184 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 PTPN1P18031 435 aaKnown RBP18.07■□□□□ 0.48
USP39-211ENST00000465282 ACAT1P24752 427 aaKnown RBP18.07■□□□□ 0.48
USP39-211ENST00000465282 MTHFRP42898 656 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 RAP1GAPP47736 663 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 DUSP4Q13115 394 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 CFAP221Q4G0U5 840 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 ATAT1Q5SQI0 421 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 B3GALNT2Q8NCR0 500 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 PGLYRP2Q96PD5 576 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 NT5C1AQ9BXI3 368 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 INTS2Q9H0H0 1204 aaKnown RBP18.07■□□□□ 0.48
USP39-211ENST00000465282 HSD3B7Q9H2F3 369 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 PRDM6Q9NQX0 595 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.07■□□□□ 0.48
USP39-211ENST00000465282 GTF3C4Q9UKN8 822 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 INSL5Q9Y5Q6 135 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 UNC80Q8N2C7 3258 aa18.07■□□□□ 0.48
USP39-211ENST00000465282 MYBPHLA2RUH7 354 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 PES1O00541 588 aaKnown RBP18.06■□□□□ 0.48
USP39-211ENST00000465282 MBTPS2O43462 519 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 RFPL2O75678 378 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 SEC24AO95486 1093 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 VNN2O95498 520 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 LRG1P02750 347 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 MAGEA11P43364 429 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 ALDH1A3P47895 512 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 NDST1P52848 882 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 RARS2Q5T160 578 aaKnown RBP18.06■□□□□ 0.48
USP39-211ENST00000465282 FKBP15Q5T1M5 1219 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 TRIM65Q6PJ69 517 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 SPATA2LQ8IUW3 424 aaPredicted RBP18.06■□□□□ 0.48
USP39-211ENST00000465282 PPM1KQ8N3J5 372 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 ATAD1Q8NBU5 361 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.06■□□□□ 0.48
USP39-211ENST00000465282 FAM200AQ8TCP9 573 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 SUSD6Q92537 303 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 ELMO3Q96BJ8 720 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 CEP295NLQ96MC4 621 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 CBX8Q9HC52 389 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 CISHQ9NSE2 258 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 ASB3Q9Y575 518 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 NME7Q9Y5B8 376 aa18.06■□□□□ 0.48
USP39-211ENST00000465282 SPTBN5Q9NRC6 3674 aaKnown RBP18.06■□□□□ 0.48
USP39-211ENST00000465282 MYH10P35580 1976 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 GRXCR2A6NFK2 248 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 GOLGA6L19H0YKK7 550 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 HAPLN1P10915 354 aaPredicted RBP18.05■□□□□ 0.48
USP39-211ENST00000465282 PON1P27169 355 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 COPB1P53618 953 aaKnown RBP18.05■□□□□ 0.48
USP39-211ENST00000465282 ZNF445P59923 1031 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 TFF2Q03403 129 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 PTCRAQ6ISU1 281 aaPredicted RBP18.05■□□□□ 0.48
USP39-211ENST00000465282 VSTM1Q6UX27 236 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 TMC5Q6UXY8 1006 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 ELMOD1Q8N336 334 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 C12orf76Q8N812 135 aaPredicted RBP18.05■□□□□ 0.48
USP39-211ENST00000465282 SMG7Q92540 1137 aaKnown RBP18.05■□□□□ 0.48
USP39-211ENST00000465282 ASB2Q96Q27 587 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 CRACR2AQ9BSW2 395 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 VPS16Q9H269 839 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 TSPY26PQ9H489 355 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 PIDD1Q9HB75 910 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 CRTAC1Q9NQ79 661 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 TMLHEQ9NVH6 421 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 ABI2Q9NYB9 513 aaPredicted RBP18.05■□□□□ 0.48
USP39-211ENST00000465282 TAB2Q9NYJ8 693 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 APEX2Q9UBZ4 518 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 CUL9Q8IWT3 2517 aa18.05■□□□□ 0.48
USP39-211ENST00000465282 C5orf42Q9H799 3197 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 ATP8B3O60423 1300 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 ATP2C2O75185 946 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 CD58P19256 250 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 SLC9A1P19634 815 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 EPHB3P54753 998 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 MFAP3P55082 362 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 PSMC1P62191 440 aaKnown RBP18.04■□□□□ 0.48
USP39-211ENST00000465282 RPL10AP62906 217 aaKnown RBP18.04■□□□□ 0.48
USP39-211ENST00000465282 LRMPQ12912 555 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 SMAD2Q15796 467 aaKnown RBP18.04■□□□□ 0.48
USP39-211ENST00000465282 CLUL1Q15846 466 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 MGAT5BQ3V5L5 792 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 PHLDB3Q6NSJ2 640 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.04■□□□□ 0.48
USP39-211ENST00000465282 ZNF707Q96C28 371 aaPredicted RBP18.04■□□□□ 0.48
USP39-211ENST00000465282 PCED1BQ96HM7 432 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 ELOVL4Q9GZR5 314 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 KIAA1257Q9ULG3 409 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 USP15Q9Y4E8 981 aaPredicted RBP18.04■□□□□ 0.48
USP39-211ENST00000465282 YIPF1Q9Y548 306 aa18.04■□□□□ 0.48
USP39-211ENST00000465282 DENND4AQ7Z401 1863 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 LGALS16A8MUM7 142 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 HCRTO43612 131 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms