RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 MINDY1Q8N5J2 469 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 OLIG1Q8TAK6 271 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 MTMR9Q96QG7 549 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 SLC22A12Q96S37 553 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 PILRBQ9UKJ0 227 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 DENND4CQ5VZ89 1909 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 ANK1P16157 1881 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 GOLGA4Q13439 2230 aaKnown RBP16.25■□□□□ 0.19
HDAC6-214ENST00000465269 NEMFO60524 1076 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 OPHN1O60890 802 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 MCF2P10911 925 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 PROZP22891 400 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 AARSP49588 968 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC6-214ENST00000465269 GPR15P49685 360 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 PEX3P56589 373 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 NLRP12P59046 1061 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 AMPD2Q01433 879 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 MESP2Q0VG99 397 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 DMP1Q13316 513 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-214ENST00000465269 MTF1Q14872 753 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 VEPH1Q14D04 833 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 PDGFRLQ15198 375 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 TRIP6Q15654 476 aaKnown RBP16.25■□□□□ 0.19
HDAC6-214ENST00000465269 TAF12Q16514 161 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 ECM1Q16610 540 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 SDHAF4Q5VUM1 108 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 LYSMD4Q5XG99 296 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 CPA6Q8N4T0 437 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 LINC00597Q9H2U6 94 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 DUS2Q9NX74 493 aaKnown RBP16.25■□□□□ 0.19
HDAC6-214ENST00000465269 PCDH15Q96QU1 1955 aa16.25■□□□□ 0.19
HDAC6-214ENST00000465269 F11P03951 625 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 HMGA1P17096 107 aaKnown RBP16.24■□□□□ 0.19
HDAC6-214ENST00000465269 NPTX2P47972 431 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 FOSBP53539 338 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 MYBPC2Q14324 1141 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 CRY1Q16526 586 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 MPZL3Q6UWV2 235 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 ALLCQ8N6M5 410 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 ADAMTS14Q8WXS8 1223 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 CYP2S1Q96SQ9 504 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 MRPL4Q9BYD3 311 aaKnown RBP16.24■□□□□ 0.19
HDAC6-214ENST00000465269 TUFT1Q9NNX1 390 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 MMP17Q9ULZ9 603 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 MAGED2Q9UNF1 606 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-214ENST00000465269 OBSL1O75147 1896 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 MGAQ8IWI9 3026 aa16.24■□□□□ 0.19
HDAC6-214ENST00000465269 PHLPP2Q6ZVD8 1323 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 OPRD1P41143 372 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 GFPT1Q06210 699 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-214ENST00000465269 C19orf57Q0VDD7 668 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 EML3Q32P44 896 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 MAP7D1Q3KQU3 841 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 ZC2HC1CQ53FD0 456 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-214ENST00000465269 EMC10Q5UCC4 262 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 ARMCX5Q6P1M9 558 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 SLCO6A1Q86UG4 719 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 LRRTM3Q86VH5 581 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 DAW1Q8N136 415 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 HMGB4Q8WW32 186 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 HAPLN2Q9GZV7 340 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 BHMT2Q9H2M3 363 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 CAPN10Q9HC96 672 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 SLC6A14Q9UN76 642 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 TSC2P49815 1807 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 ATMQ13315 3056 aa16.23■□□□□ 0.19
HDAC6-214ENST00000465269 PTPRBP23467 1997 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 SHROOM3Q8TF72 1996 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 UNC79Q9P2D8 2635 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 SGK1O00141 431 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 TADA3O75528 432 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 KLF8O95600 359 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-214ENST00000465269 LRPAP1P30533 357 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 TNFSF9P41273 254 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 IFNAR2P48551 515 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 SCRN1Q12765 414 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
HDAC6-214ENST00000465269 EFCAB13Q8IY85 973 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-214ENST00000465269 TXNDC5Q8NBS9 432 aaKnown RBP16.22■□□□□ 0.19
HDAC6-214ENST00000465269 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 OSCP1Q8WVF1 389 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 SENP8Q96LD8 212 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 TRPC7Q9HCX4 862 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 SCUBE2Q9NQ36 999 aa16.22■□□□□ 0.19
HDAC6-214ENST00000465269 ABI2Q9NYB9 513 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-214ENST00000465269 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDAC6-214ENST00000465269 HELZP42694 1942 aaKnown RBP16.21■□□□□ 0.19
HDAC6-214ENST00000465269 SCAMP3O14828 347 aaKnown RBP16.21■□□□□ 0.19
HDAC6-214ENST00000465269 SLC16A4O15374 487 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 PLA2G2AP14555 144 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 TIE1P35590 1138 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 KRT2P35908 639 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 TUFMP49411 452 aaKnown RBP16.21■□□□□ 0.19
HDAC6-214ENST00000465269 ZNF77Q15935 545 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 DUOXA1Q1HG43 343 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 GAB4Q2WGN9 574 aa16.21■□□□□ 0.19
HDAC6-214ENST00000465269 BMP2KLQ5H9B9 411 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms