RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SPATA18Q8TC71 538 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 SAMD11Q96NU1 681 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 TWNKQ96RR1 684 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 RTP3Q9BQQ7 232 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 TTPALQ9BTX7 342 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 SNX25Q9H3E2 840 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 CDC23Q9UJX2 597 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 STXBP5LQ9Y2K9 1186 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 BZW2Q9Y6E2 419 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 A0A1W2PPC1 479 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 ZNF263O14978 683 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 PJA2O43164 708 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 AKR1B10O60218 316 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 TADA3O75528 432 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 ABL1P00519 1130 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 PLEKP08567 350 aaPredicted RBP18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 PDGFRBP09619 1106 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 KRT5P13647 590 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 DNAJB2P25686 324 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 SOX5P35711 763 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 USP8P40818 1118 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 ZNF132P52740 706 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 YWHAHQ04917 246 aaPredicted RBP18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 ZNF394Q53GI3 561 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 VARS2Q5ST30 1063 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 VPS52Q8N1B4 723 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 ELOVL4Q9GZR5 314 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 CDH23Q9H251 3354 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 SLC28A3Q9HAS3 691 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 ALG13Q9NP73 1137 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 DDX43Q9NXZ2 648 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 GUCA1BQ9UMX6 200 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 PCDHA13Q9Y5I0 950 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 A8MXQ7 604 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 CYP26A1O43174 497 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 RAD23BP54727 409 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 TUBB4BP68371 445 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 RBM10P98175 930 aaKnown RBP18■□□□□ 0.47
EXOSC3-203ENST00000465229 ORC1Q13415 861 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 PPP2R2DQ66LE6 453 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 SMYD5Q6GMV2 418 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 UNC93AQ86WB7 457 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 GPIHBP1Q8IV16 184 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 RBBP8NLQ8NC74 664 aaPredicted RBP18■□□□□ 0.47
EXOSC3-203ENST00000465229 SPPL3Q8TCT6 385 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 HERC2P3Q9BVR0 1158 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 NT5C1AQ9BXI3 368 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 LUC7LQ9NQ29 371 aaKnown RBP18■□□□□ 0.47
EXOSC3-203ENST00000465229 GBF1Q92538 1859 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 KIAA1671Q9BY89 1806 aa18■□□□□ 0.47
EXOSC3-203ENST00000465229 GFPT2O94808 682 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 DSG1Q02413 1049 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 ASIC2Q16515 512 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 KIAA0319Q5VV43 1072 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 IRF2BP2Q7Z5L9 587 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 FMNL3Q8IVF7 1028 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 THEM5Q8N1Q8 247 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 SLC4A11Q8NBS3 891 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 LNX1Q8TBB1 728 aaPredicted RBP17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 RIN2Q8WYP3 895 aaPredicted RBP17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 TIFAQ96CG3 184 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 C11orf84Q9BUA3 381 aaPredicted RBP17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 CARD6Q9BX69 1037 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 LACRTQ9GZZ8 138 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 DPEP3Q9H4B8 488 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 CERS4Q9HA82 394 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 ACP6Q9NPH0 428 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 STK39Q9UEW8 545 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 PUF60Q9UHX1 559 aaKnown RBP17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 LZTS1Q9Y250 596 aa17.99■□□□□ 0.47
EXOSC3-203ENST00000465229 RCCD1A6NED2 376 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 RRP9O43818 475 aaKnown RBP17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 CALCAP01258 141 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ACAT1P24752 427 aaKnown RBP17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 PRKCIP41743 596 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ARID5AQ03989 594 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 KIAA1841Q6NSI8 718 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 PRSS55Q6UWB4 352 aaPredicted RBP17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ACOT1Q86TX2 421 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 CRYBG2Q8N1P7 616 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 CEP112Q8N8E3 955 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 PIK3R5Q8WYR1 880 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 TMEM176AQ96HP8 235 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ACBD6Q9BR61 282 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 MYO9BQ13459 2157 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 VWA8A3KMH1 1905 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 H3BNC9 293 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 GRM6O15303 877 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 TBC1D4O60343 1298 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 ATP2C2O75185 946 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 DNAJB1P25685 340 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 PCSK1P29120 753 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 GLUD2P49448 558 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 WHAMMP3Q1A5X7 153 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 CTXN3Q4LDR2 81 aa17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 TDRD12Q587J7 1177 aaKnown RBP17.98■□□□□ 0.47
EXOSC3-203ENST00000465229 C10orf76Q5T2E6 689 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms