RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 RFPL2O75678 378 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 CLSTN1O94985 981 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 SEC24AO95486 1093 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 VNN2O95498 520 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 SPATA31D3P0C874 917 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 MTIF2P46199 727 aaKnown RBP14.62□□□□□ -0.07
LIMD1-203ENST00000465039 ALDH1A3P47895 512 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 EPHB3P54753 998 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 EPHA5P54756 1037 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 RPL10AP62906 217 aaKnown RBP14.62□□□□□ -0.07
LIMD1-203ENST00000465039 KCNJ12Q14500 433 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 VEPH1Q14D04 833 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 TCP11X2Q5H9J9 407 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 SPATA31D4Q6ZUB0 917 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 C11orf57Q6ZUT1 292 aaPredicted RBP14.62□□□□□ -0.07
LIMD1-203ENST00000465039 ENOSF1Q7L5Y1 443 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 ITIH5Q86UX2 942 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 LRRTM3Q86VH5 581 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 LMO3Q8TAP4 145 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 NT5C1BQ96P26 610 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 TUBGCP2Q9BSJ2 902 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 APOBEC3GQ9HC16 384 aaKnown RBP14.62□□□□□ -0.07
LIMD1-203ENST00000465039 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.62□□□□□ -0.07
LIMD1-203ENST00000465039 EHD2Q9NZN4 543 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 POLIQ9UNA4 740 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 NR2E1Q9Y466 385 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 CLUHO75153 1309 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 PTPRDP23468 1912 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 SMTNL1A8MU46 457 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 TPM2P07951 284 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 OR4Q2P0C623 313 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 HAPLN1P10915 354 aaPredicted RBP14.61□□□□□ -0.07
LIMD1-203ENST00000465039 PTPN1P18031 435 aaKnown RBP14.61□□□□□ -0.07
LIMD1-203ENST00000465039 RFX1P22670 979 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 ZP2Q05996 745 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 DUSP4Q13115 394 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 CUL2Q13617 745 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 CLUL1Q15846 466 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 IQCEQ6IPM2 695 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 GBP6Q6ZN66 633 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 OTOP3Q7RTS5 596 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 SPATA2LQ8IUW3 424 aaPredicted RBP14.61□□□□□ -0.07
LIMD1-203ENST00000465039 C12orf76Q8N812 135 aaPredicted RBP14.61□□□□□ -0.07
LIMD1-203ENST00000465039 ATAD1Q8NBU5 361 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 TMEM209Q96SK2 561 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 PI4K2AQ9BTU6 479 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 NT5C1AQ9BXI3 368 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 DNAJC25Q9H1X3 360 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 NDST4Q9H3R1 872 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 PIDD1Q9HB75 910 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 CRTAC1Q9NQ79 661 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 GCNT4Q9P109 453 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 ZMYM5Q9UJ78 669 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 DAAM1Q9Y4D1 1078 aa14.61□□□□□ -0.07
LIMD1-203ENST00000465039 LRRC10BA6NIK2 292 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 SOBPA7XYQ1 873 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 ZNF197O14709 1029 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 IL9P15248 144 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 ZNF18P17022 549 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 PTPN2P17706 415 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 ACAT1P24752 427 aaKnown RBP14.6□□□□□ -0.07
LIMD1-203ENST00000465039 LMO2P25791 158 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 ANO6Q4KMQ2 910 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 VWA3BQ502W6 1294 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 SPOPLQ6IQ16 392 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 SCARA5Q6ZMJ2 495 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 PLCD3Q8N3E9 789 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 EHBP1Q8NDI1 1231 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 ADAMTS19Q8TE59 1207 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 PSMG2Q969U7 264 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 ACSF2Q96CM8 615 aaPredicted RBP14.6□□□□□ -0.07
LIMD1-203ENST00000465039 PCED1BQ96HM7 432 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 SPATA17Q96L03 361 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 PGLYRP2Q96PD5 576 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 SDCBP2Q9H190 292 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 POMKQ9H5K3 350 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 CISHQ9NSE2 258 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 ABI2Q9NYB9 513 aaPredicted RBP14.6□□□□□ -0.07
LIMD1-203ENST00000465039 GTF3C4Q9UKN8 822 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 KIAA1257Q9ULG3 409 aa14.6□□□□□ -0.07
LIMD1-203ENST00000465039 SYCE3A1L190 88 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 MYBPHLA2RUH7 354 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 LOC730098B7Z3J9 87 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 TRIM66O15016 1216 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 ZNF165P49910 485 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 NDST1P52848 882 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 TWF1Q12792 350 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 NCAPHQ15003 741 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 EXOC3L4Q17RC7 722 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 ZSCAN23Q3MJ62 389 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 MGAT5BQ3V5L5 792 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 PABPC1LQ4VXU2 614 aaKnown RBP14.59□□□□□ -0.07
LIMD1-203ENST00000465039 MIIPQ5JXC2 388 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 TRIM65Q6PJ69 517 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 ZDHHC14Q8IZN3 488 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 MYLPFQ96A32 169 aa14.59□□□□□ -0.07
LIMD1-203ENST00000465039 TRMT2BQ96GJ1 504 aaKnown RBP14.59□□□□□ -0.07
LIMD1-203ENST00000465039 C8orf48Q96LL4 319 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms