RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 GJD3Q8N144 294 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 TTC9BQ8N6N2 239 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 SEMA4DQ92854 862 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 ACSF2Q96CM8 615 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 CORO1BQ9BR76 489 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 CRISPLD1Q9H336 500 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 TMLHEQ9NVH6 421 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 HCFC1R1Q9NWW0 138 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 VCANP13611 3396 aa12.85□□□□□ -0.35
RPUSD3-211ENST00000464783 MYBPHLA2RUH7 354 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 LRRN2O75325 713 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 PAPLNO95428 1278 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 AFPP02771 609 aaKnown RBP12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 POU2F2P09086 479 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 CD58P19256 250 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 FSHRP23945 695 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 ASPAP45381 313 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 NTHL1P78549 312 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 KCNH2Q12809 1159 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 TAF12Q16514 161 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 KLHL40Q2TBA0 621 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 HSP90AA4PQ58FG1 418 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 MDH1BQ5I0G3 518 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 OTOP3Q7RTS5 596 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 MYLPFQ96A32 169 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 TNIP3Q96KP6 325 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 MED15Q96RN5 788 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 SDCBP2Q9H190 292 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 DPEP3Q9H4B8 488 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 THAP9Q9H5L6 903 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 APOBEC3GQ9HC16 384 aaKnown RBP12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 ASAH2Q9NR71 780 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 NOTCH4Q99466 2003 aa12.84□□□□□ -0.35
RPUSD3-211ENST00000464783 C2CD4DB7Z1M9 353 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 LOC730098B7Z3J9 87 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 RHOP08100 348 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 HAPLN1P10915 354 aaPredicted RBP12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 MYL4P12829 197 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 PTPN1P18031 435 aaKnown RBP12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 NDST1P52848 882 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 TYRO3Q06418 890 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 LRMPQ12912 555 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 CYP4A22Q5TCH4 519 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 FAM171BQ6P995 826 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 PDZD4Q76G19 769 aaPredicted RBP12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 ITIH5Q86UX2 942 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 SCN4BQ8IWT1 228 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 MYCBPAPQ8TBZ2 947 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 PKMYT1Q99640 499 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 MED10Q9BTT4 135 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 BCO2Q9BYV7 579 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 NAT10Q9H0A0 1025 aaKnown RBP12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 DNAJC25Q9H1X3 360 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 CYP3A43Q9HB55 503 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 ABCB6Q9NP58 842 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 CEP72Q9P209 647 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 COQ4Q9Y3A0 265 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 MRPS23Q9Y3D9 190 aaKnown RBP12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 NFE2L3Q9Y4A8 694 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 NME7Q9Y5B8 376 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 ATP8B3O60423 1300 aa12.83□□□□□ -0.36
RPUSD3-211ENST00000464783 DOCK8Q8NF50 2099 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 PES1O00541 588 aaKnown RBP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 DLL1O00548 723 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 P4HA2O15460 535 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 LETM1O95202 739 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 ATF6P18850 670 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 BDNFP23560 247 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 CYP2F1P24903 491 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 RPL10AP62906 217 aaKnown RBP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 ORC1Q13415 861 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 CFAP221Q4G0U5 840 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 C11orf57Q6ZUT1 292 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 ACOT1Q86TX2 421 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 UNC93AQ86WB7 457 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 PLCD3Q8N3E9 789 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 TTC39CQ8N584 583 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 LEMD2Q8NC56 503 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 ENOX1Q8TC92 643 aaKnown RBP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 GPR152Q8TDT2 470 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 GIPC2Q8TF65 315 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 PCED1BQ96HM7 432 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 FUBP3Q96I24 572 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 FAXDC2Q96IV6 333 aa12.82□□□□□ -0.36
RPUSD3-211ENST00000464783 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms