RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 TMEM150AQ86TG1 271 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 WDR5BQ86VZ2 330 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 SYNPOQ8N3V7 929 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 USP13Q92995 863 aaPredicted RBP16.5■□□□□ 0.23
CMSS1-202ENST00000463526 ZNF560Q96MR9 790 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 FAM83CQ9BQN1 747 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 ST6GALNAC4Q9H4F1 302 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 MRPL44Q9H9J2 332 aaKnown RBP16.5■□□□□ 0.23
CMSS1-202ENST00000463526 HPS4Q9NQG7 708 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.5■□□□□ 0.23
CMSS1-202ENST00000463526 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
CMSS1-202ENST00000463526 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
CMSS1-202ENST00000463526 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 OTOL1A6NHN0 477 aaPredicted RBP16.49■□□□□ 0.23
CMSS1-202ENST00000463526 GOLGA8JA6NMD2 632 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 GRSF1Q12849 480 aaKnown RBP eCLIP16.49■□□□□ 0.23
CMSS1-202ENST00000463526 DDR2Q16832 855 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 FSTL4Q6MZW2 842 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 CC2D1AQ6P1N0 951 aaPredicted RBP16.49■□□□□ 0.23
CMSS1-202ENST00000463526 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 MRPS31Q92665 395 aaKnown RBP16.49■□□□□ 0.23
CMSS1-202ENST00000463526 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 TDP1Q9NUW8 608 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 CCDC39Q9UFE4 941 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
CMSS1-202ENST00000463526 ANK1P16157 1881 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 MYMKA6NI61 221 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 KRT37O76014 449 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 GCNT3O95395 438 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 EGFP01133 1207 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 ITGB3P05106 788 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 KRT19P08727 400 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 CYP2F1P24903 491 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 CEBPZQ03701 1054 aaKnown RBP16.48■□□□□ 0.23
CMSS1-202ENST00000463526 SF3A2Q15428 464 aaKnown RBP16.48■□□□□ 0.23
CMSS1-202ENST00000463526 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 TMEM196Q5HYL7 178 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 RRAGBQ5VZM2 374 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 NAIF1Q69YI7 327 aaPredicted RBP16.48■□□□□ 0.23
CMSS1-202ENST00000463526 SYCP3Q8IZU3 236 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 CLIC6Q96NY7 704 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 ACCSQ96QU6 501 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 PANK2Q9BZ23 570 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 FBRSL1Q9HCM7 1045 aaKnown RBP16.48■□□□□ 0.23
CMSS1-202ENST00000463526 TRPC7Q9HCX4 862 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 DDX43Q9NXZ2 648 aaKnown RBP16.48■□□□□ 0.23
CMSS1-202ENST00000463526 L1RE1Q9UN81 338 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 EXOC7Q9UPT5 735 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 CACNA1BQ00975 2339 aa16.48■□□□□ 0.23
CMSS1-202ENST00000463526 HCRTO43612 131 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 HUS1O60921 280 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 RNF40O75150 1001 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 RPP40O75818 363 aaKnown RBP16.47■□□□□ 0.23
CMSS1-202ENST00000463526 PPP1R37O75864 691 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 ADRB1P08588 477 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 CSH1P0DML2 217 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 CSH2P0DML3 217 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 CCDC192P0DO97 292 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 IDEP14735 1019 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 DDX6P26196 483 aaKnown RBP eCLIP16.47■□□□□ 0.23
CMSS1-202ENST00000463526 HOXA6P31267 233 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 PNPLA4P41247 253 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 GALK1P51570 392 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 NFE2Q16621 373 aaPredicted RBP16.47■□□□□ 0.23
CMSS1-202ENST00000463526 AASDHQ4L235 1098 aaPredicted RBP16.47■□□□□ 0.23
CMSS1-202ENST00000463526 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
CMSS1-202ENST00000463526 SV2BQ7L1I2 683 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 KBTBD6Q86V97 674 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 MON1AQ86VX9 555 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 OSTM1Q86WC4 334 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 C1orf127Q8N9H9 656 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 CACTINQ8WUQ7 758 aaKnown RBP16.47■□□□□ 0.23
CMSS1-202ENST00000463526 HVCN1Q96D96 273 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 CHFRQ96EP1 664 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 CYP2S1Q96SQ9 504 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 PCIF1Q9H4Z3 704 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 ZMYM5Q9UJ78 669 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 TSC2P49815 1807 aa16.47■□□□□ 0.23
CMSS1-202ENST00000463526 TRDMT1O14717 391 aaKnown RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 ATG13O75143 517 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 GAP43P17677 238 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 CASP5P51878 434 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 RPL10AP62906 217 aaKnown RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 MYL7Q01449 175 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 POU5F1Q01860 360 aaKnown RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 LMBRD2Q68DH5 695 aaPredicted RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 IL31Q6EBC2 164 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 FAM173BQ6P4H8 233 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 CACNA2D4Q7Z3S7 1137 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 NT5DC4Q86YG4 428 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 BRSK2Q8IWQ3 736 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 SCN4BQ8IWT1 228 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 C12orf50Q8NA57 414 aaPredicted RBP16.46■□□□□ 0.23
CMSS1-202ENST00000463526 GAB3Q8WWW8 586 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 HHIPQ96QV1 700 aa16.46■□□□□ 0.23
CMSS1-202ENST00000463526 ACBD6Q9BR61 282 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms