RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FAM129AQ9BZQ8 928 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 CERS4Q9HA82 394 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 SEPT11Q9NVA2 429 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
PTPRD-207ENST00000463477 RWDD3Q9Y3V2 267 aa10.53□□□□□ -0.72
PTPRD-207ENST00000463477 INO80B-WBP1J3KQ70 363 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 HNRNPDLO14979 420 aaKnown RBP10.52□□□□□ -0.73
PTPRD-207ENST00000463477 CYP26A1O43174 497 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 HOXA2O43364 376 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 PHF2O75151 1096 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 LDHAP00338 332 aaKnown RBP10.52□□□□□ -0.73
PTPRD-207ENST00000463477 RB1P06400 928 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 LINC00271P0C7V0 271 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 ITGA4P13612 1032 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 FOSL2P15408 326 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 CHRNA3P32297 505 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 CTNNA1P35221 906 aaKnown RBP10.52□□□□□ -0.73
PTPRD-207ENST00000463477 BMPR1AP36894 532 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 HSD17B3P37058 310 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 BPIFB4P59827 614 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 MBTD1Q05BQ5 628 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 ADGRE1Q14246 886 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 HLTFQ14527 1009 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTPRD-207ENST00000463477 AMHR2Q16671 573 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 CYP1B1Q16678 543 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 DUPD1Q68J44 220 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 CDCA2Q69YH5 1023 aaPredicted RBP10.52□□□□□ -0.73
PTPRD-207ENST00000463477 TWF2Q6IBS0 349 aaKnown RBP10.52□□□□□ -0.73
PTPRD-207ENST00000463477 SLFN12LQ6IEE8 588 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 ACAD10Q6JQN1 1059 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 PPP1R2P3Q6NXS1 205 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 SPRED2Q7Z698 418 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 TMEM192Q8IY95 271 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 RSPH1Q8WYR4 309 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 ALG3Q92685 438 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 ARL8AQ96BM9 186 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 SAAL1Q96ER3 474 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 TRIM11Q96F44 468 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 ATP6V1G3Q96LB4 118 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 C17orf80Q9BSJ5 609 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 CAPS2Q9BXY5 557 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 FZD8Q9H461 694 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
PTPRD-207ENST00000463477 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 PCYOX1Q9UHG3 505 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 AMACRQ9UHK6 382 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 COL4A6Q14031 1691 aa10.52□□□□□ -0.73
PTPRD-207ENST00000463477 EPOPA6NHQ4 379 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 LRRIQ4A6NIV6 560 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 C5orf67F2Z3F1 127 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 PODXLO00592 558 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 TTI1O43156 1089 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 LPXNO60711 386 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 ERLIN2O94905 339 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 MYBL1P10243 752 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 RAB27AP51159 221 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 IRAK1P51617 712 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 GUCY2FP51841 1108 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 BIRC3Q13489 604 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 TRADDQ15628 312 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 FAM187BQ17R55 369 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 CLEC16AQ2KHT3 1053 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 ZACNQ401N2 412 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 SEL1L2Q5TEA6 688 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 MRPL10Q7Z7H8 261 aaKnown RBP10.51□□□□□ -0.73
PTPRD-207ENST00000463477 SLC47A2Q86VL8 602 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 C12orf50Q8NA57 414 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-207ENST00000463477 ZNF564Q8TBZ8 553 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-207ENST00000463477 TAS1R2Q8TE23 839 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 ERP44Q9BS26 406 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 KIFC3Q9BVG8 833 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 TXLNGYQ9BZA5 131 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 C2orf40Q9H1Z8 148 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 TMEM134Q9H6X4 195 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 TMBIM4Q9HC24 238 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 FAM105AQ9NUU6 356 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 PRMT7Q9NVM4 692 aaPredicted RBP10.51□□□□□ -0.73
PTPRD-207ENST00000463477 RASAL2Q9UJF2 1139 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 PCDHA3Q9Y5H8 950 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 NFS1Q9Y697 457 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 TRANK1O15050 2925 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 ANK1P16157 1881 aa10.51□□□□□ -0.73
PTPRD-207ENST00000463477 A0A1B0GUA9 196 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 H3BNC9 293 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 RFXAPO00287 272 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 TULP2O00295 520 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 TSPAN1O60635 241 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 PPFIA2O75334 1257 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 MMEP08473 750 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 FGFR1P11362 822 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 ATF7P17544 494 aaPredicted RBP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 COMTP21964 271 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 USP8P40818 1118 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 LIG4P49917 911 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 EFNA5P52803 228 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 EIF3BP55884 814 aaKnown RBP10.5□□□□□ -0.73
PTPRD-207ENST00000463477 DR1Q01658 176 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 STRN3Q13033 797 aa10.5□□□□□ -0.73
PTPRD-207ENST00000463477 UAP1Q16222 522 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms