RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 ATP8B3O60423 1300 aa13.04□□□□□ -0.32
LINC00879-202ENST00000463200 PTPRJQ12913 1337 aa13.04□□□□□ -0.32
LINC00879-202ENST00000463200 NOTCH4Q99466 2003 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 A8MXQ7 604 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 IKBKBO14920 756 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 MAPK13O15264 365 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 STX10O60499 249 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 SOAT2O75908 522 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
LINC00879-202ENST00000463200 WARSP23381 471 aaKnown RBP13.03□□□□□ -0.32
LINC00879-202ENST00000463200 PSMC2P35998 433 aaKnown RBP13.03□□□□□ -0.32
LINC00879-202ENST00000463200 PPP1R2P41236 205 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 GPC5P78333 572 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 PRKCQQ04759 706 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 ADAM9Q13443 819 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 PNOCQ13519 176 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 SNW1Q13573 536 aaKnown RBP13.03□□□□□ -0.32
LINC00879-202ENST00000463200 TEAD2Q15562 447 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 NFIL3Q16649 462 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 SGSM1Q2NKQ1 1148 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 GPR158Q5T848 1215 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 SCN4BQ8IWT1 228 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
LINC00879-202ENST00000463200 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 PARD3BQ8TEW8 1205 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 TAF4BQ92750 862 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 IRF7Q92985 503 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 TCEAL4Q96EI5 215 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 CRISPLD1Q9H336 500 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 DMAC2Q9NW81 257 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 GTF3C4Q9UKN8 822 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 MAGED2Q9UNF1 606 aaPredicted RBP13.03□□□□□ -0.32
LINC00879-202ENST00000463200 KMT2EQ8IZD2 1858 aa13.03□□□□□ -0.32
LINC00879-202ENST00000463200 LRRIQ3A6PVS8 624 aaPredicted RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 GABRDO14764 452 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 ZNF263O14978 683 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 TRIM66O15016 1216 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 CETN3O15182 167 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 NCAM2O15394 837 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 TACC1O75410 805 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 VNN2O95498 520 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 PDGFBP01127 241 aaPredicted RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 PDGFRBP09619 1106 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 EPB41P11171 864 aaKnown RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 GJA1P17302 382 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 PSMC3P17980 439 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 AOC1P19801 751 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 PIK3CAP42336 1068 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 VAMP7P51809 220 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 MYL6P60660 151 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 NCOA4Q13772 614 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 CFAP221Q4G0U5 840 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 FAM78AQ5JUQ0 283 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 ZNF658Q5TYW1 1059 aaPredicted RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 LRRTM3Q86VH5 581 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 FAM186BQ8IYM0 893 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 TTC9BQ8N6N2 239 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 CXorf38Q8TB03 319 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 SHKBP1Q8TBC3 707 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 DNASE1L2Q92874 299 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 FAM84AQ96KN4 292 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 TNIP3Q96KP6 325 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 ASB16Q96NS5 453 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 DNAJC25Q9H1X3 360 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 TBC1D17Q9HA65 648 aa13.02□□□□□ -0.33
LINC00879-202ENST00000463200 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
LINC00879-202ENST00000463200 PSMA7O14818 248 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 ATF6P18850 670 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 AVPR1AP37288 418 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 GRIK1P39086 918 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 CCR2P41597 374 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 MAGEA11P43364 429 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 CASP4P49662 377 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 PDE6CP51160 858 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 CDR1P51861 262 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 ENPEPQ07075 957 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 MLF2Q15773 248 aaPredicted RBP13.01□□□□□ -0.33
LINC00879-202ENST00000463200 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 SLC44A4Q53GD3 710 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 TANGO2Q6ICL3 276 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 PHLDB3Q6NSJ2 640 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 VSTM1Q6UX27 236 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 TMC8Q8IU68 726 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 CEP295NLQ96MC4 621 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 NELL2Q99435 816 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 RPP25Q9BUL9 199 aaKnown RBP13.01□□□□□ -0.33
LINC00879-202ENST00000463200 TASP1Q9H6P5 420 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 CHMP5Q9NZZ3 219 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 SIT1Q9Y3P8 196 aa13.01□□□□□ -0.33
LINC00879-202ENST00000463200 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
LINC00879-202ENST00000463200 NUP210Q8TEM1 1887 aaPredicted RBP13□□□□□ -0.33
LINC00879-202ENST00000463200 MYBPHLA2RUH7 354 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms